RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 CCDC50Q8IVM0 306 aa13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 MTMR14Q8NCE2 650 aa13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 RASGRP4Q8TDF6 673 aa13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 NUP88Q99567 741 aaPredicted RBP13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 SLC24A3Q9HC58 644 aa13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 ETAA1Q9NY74 926 aa13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 PCDHA4Q9UN74 947 aa13.27□□□□□ -0.29
PHACTR3-205ENST00000395636 PCNTO95613 3336 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 A0A1W2PRG0 241 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 TMEM232C9JQI7 657 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 FNTAP49354 379 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 DPYDQ12882 1025 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 PPFIA1Q13136 1202 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 ABCB5Q2M3G0 1257 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 ARL6IP4Q66PJ3 421 aaKnown RBP13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 WWC2Q6AWC2 1192 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 GALNT17Q6IS24 598 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 WDR93Q6P2C0 686 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 DLK2Q6UY11 383 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 MICALCLQ6ZW33 695 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 PIGSQ96S52 555 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 LZTS2Q9BRK4 669 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 ZSWIM4Q9H7M6 989 aa13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 POLR2AP24928 1970 aaKnown RBP13.26□□□□□ -0.29
PHACTR3-205ENST00000395636 SYF2O95926 243 aaKnown RBP13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 MCM7P33993 719 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 ECE1P42892 770 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 RASA3Q14644 834 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 SPATA1Q5VX52 437 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 HEATR3Q7Z4Q2 680 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 TRMT44Q8IYL2 757 aaKnown RBP13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 IGSF22Q8N9C0 903 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 CCDC148Q8NFR7 591 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 BCAS4Q8TDM0 211 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 INTS13Q9NVM9 706 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 PUF60Q9UHX1 559 aaKnown RBP13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 LRRIQ3A6PVS8 624 aaPredicted RBP13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 VSNL1P62760 191 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 SPECC1LQ69YQ0 1117 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 SMCHD1A6NHR9 2005 aa13.25□□□□□ -0.29
PHACTR3-205ENST00000395636 CTAGE15A4D2H0 777 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 RTN2O75298 545 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 CTAGE8P0CG41 777 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 LONP1P36776 959 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 EPS15P42566 896 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 INHBEP58166 350 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 TBC1D8BQ0IIM8 1120 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 PLCB4Q15147 1175 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 HSP90AA4PQ58FG1 418 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 KIAA1755Q5JYT7 1200 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 CTAGE6Q86UF2 777 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 CTAGE4Q8IX94 777 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 SPICE1Q8N0Z3 855 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 ACER1Q8TDN7 264 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 TATDN2Q93075 761 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 CD248Q9HCU0 757 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 HACL1Q9UJ83 578 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 DICER1Q9UPY3 1922 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 SYNRGQ9UMZ2 1314 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 CCDC194A0A1B0GVG4 234 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 KIF5CO60282 957 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 IPO7O95373 1038 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 EZRP15311 586 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 CLNS1AP54105 237 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 RWDD2BP57060 319 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 SNAP25P60880 206 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 CUL4BQ13620 913 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 WHAMMP3Q1A5X7 153 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 TMEM139Q8IV31 216 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 DAGLBQ8NCG7 672 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 CCDC17Q96LX7 622 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 TEPSINQ96N21 525 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 MED15Q96RN5 788 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 GLIS2Q9BZE0 524 aaPredicted RBP13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 SAMSN1Q9NSI8 373 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 KLC4Q9NSK0 619 aa13.24□□□□□ -0.29
PHACTR3-205ENST00000395636 EIF3HO15372 352 aaKnown RBP eCLIP13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 DDNO94850 711 aaPredicted RBP13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 LMNB1P20700 586 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 CDR1P51861 262 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 SMTNP53814 917 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 ZNF543Q08ER8 600 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 NR1I3Q14994 352 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 CCDC96Q2M329 555 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 CEP85LQ5SZL2 805 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 YTHDF3Q7Z739 585 aaKnown RBP13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 MAGEC3Q8TD91 643 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 CAPS2Q9BXY5 557 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 A0A1B0GTH6 734 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 STXBP3O00186 592 aa13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 MEFVO15553 781 aaPredicted RBP13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 GTPBP6O43824 516 aaPredicted RBP13.23□□□□□ -0.29
PHACTR3-205ENST00000395636 PPP1R11O60927 126 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms