RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 TM4SF1P30408 202 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 MPP3Q13368 585 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 SLC5A9Q2M3M2 681 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 MAF1Q9H063 256 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 LSG1Q9H089 658 aaKnown RBP12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 RNF41Q9H4P4 317 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 EPN1Q9Y6I3 576 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 M0R2C6 588 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 RTN2O75298 545 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 UBXN1Q04323 297 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 GPR162Q16538 588 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 CCDC174Q6PII3 467 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 ARHGAP27Q6ZUM4 889 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 DAAM2Q86T65 1068 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 LCA5Q86VQ0 697 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 TRIML1Q8N9V2 468 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 BLOC1S6Q9UL45 172 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 FAF1Q9UNN5 650 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 NOVA2Q9UNW9 492 aaKnown RBP12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 RASSF9O75901 435 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 STYK1Q6J9G0 422 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 CCDC42Q96M95 316 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 EPB41L5Q9HCM4 733 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 NFU1Q9UMS0 254 aa12.41□□□□□ -0.42
RAPGEF3-202ENST00000395358 PHF20L1A8MW92 1017 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 E2F6O75461 281 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 FNTAP49354 379 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 TBC1D25Q3MII6 688 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 RBM12BQ8IXT5 1001 aaKnown RBP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 TRIM11Q96F44 468 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 CDK5RAP3Q96JB5 506 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 MKNK2Q9HBH9 465 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 ATP6V0A2Q9Y487 856 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 SLC27A2O14975 620 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 ELF3P78545 371 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 TMEM110Q86TL2 294 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 KLHL7Q8IXQ5 586 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 TMTC2Q8N394 836 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 CEP70Q8NHQ1 597 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 ATP6V1G3Q96LB4 118 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 FAM227BQ96M60 508 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 GGT7Q9UJ14 662 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 TARSL2A2RTX5 802 aaKnown RBP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 ANKRD33BA6NCL7 494 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 SPDYE3A6NKU9 549 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 MBD4O95243 580 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 NCAPG2Q86XI2 1143 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 ARHGAP18Q8N392 663 aa12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 RRP36Q96EU6 259 aaKnown RBP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
RAPGEF3-202ENST00000395358 ZNF532Q9HCE3 1301 aa12.4□□□□□ -0.43
RAPGEF3-202ENST00000395358 RNF8O76064 485 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 PRPF6O94906 941 aaKnown RBP12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 PI4K2BQ8TCG2 481 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 CCDC51Q96ER9 411 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 DYDC2Q96IM9 177 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 PANX2Q96RD6 677 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 NUP58Q9BVL2 599 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 PSMD7P51665 324 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 HAND2P61296 217 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 GPSM2P81274 684 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 TDRD12Q587J7 1177 aaKnown RBP12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 TRAIPQ9BWF2 469 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 GJA3Q9Y6H8 435 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 SRGNP10124 158 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 KIF2BQ8N4N8 673 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 MLKLQ8NB16 471 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 MGARPQ8TDB4 240 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 AGAP11Q8TF27 550 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 ZIM3Q96PE6 472 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 CTTNBP2NLQ9P2B4 639 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 PCDHGC5Q9Y5F6 944 aa12.39□□□□□ -0.43
RAPGEF3-202ENST00000395358 HEXIM1O94992 359 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 TMOD1P28289 359 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 TNNC1P63316 161 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 RASGRF1Q13972 1273 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 ANO1Q5XXA6 986 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 TC2NQ8N9U0 490 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 BPIFA3Q9BQP9 254 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 KCNK9Q9NPC2 374 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 GPAA1O43292 621 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 SHOX2O60902 331 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 PDE6AP16499 860 aa12.38□□□□□ -0.43
RAPGEF3-202ENST00000395358 CXCR5P32302 372 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms