RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 KCNJ6P48051 423 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 ZNF200P98182 395 aaPredicted RBP22.33■■□□□ 1.17
COL11A2-204ENST00000395194 GHRHRQ02643 423 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 GPNMBQ14956 572 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 KRT40Q6A162 431 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 ATXN2LQ8WWM7 1075 aaKnown RBP22.33■■□□□ 1.17
COL11A2-204ENST00000395194 ARNTL2Q8WYA1 636 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 WNT8BQ93098 351 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 SPATA33Q96N06 139 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 KATNAL1Q9BW62 490 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 RIOX1Q9H6W3 641 aa22.33■■□□□ 1.17
COL11A2-204ENST00000395194 GCOM1H8Y6P7 765 aaPredicted RBP22.32■■□□□ 1.16
COL11A2-204ENST00000395194 F2P00734 622 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 POLR2MP0CAP2 368 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 CKBP12277 381 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 UBA1P22314 1058 aaKnown RBP22.32■■□□□ 1.16
COL11A2-204ENST00000395194 WDR5P61964 334 aaKnown RBP22.32■■□□□ 1.16
COL11A2-204ENST00000395194 SP2Q02086 613 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 TAP1Q03518 808 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 SKIV2LQ15477 1246 aaKnown RBP22.32■■□□□ 1.16
COL11A2-204ENST00000395194 TCTN1Q2MV58 587 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 HSDL1Q3SXM5 330 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 MYSM1Q5VVJ2 828 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 NCOA7Q8NI08 942 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 PHOSPHO2Q8TCD6 241 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 ASB2Q96Q27 587 aa22.32■■□□□ 1.16
COL11A2-204ENST00000395194 KIF28PB7ZC32 967 aa22.31■■□□□ 1.16
COL11A2-204ENST00000395194 TLL1O43897 1013 aa22.31■■□□□ 1.16
COL11A2-204ENST00000395194 NBNO60934 754 aa22.31■■□□□ 1.16
COL11A2-204ENST00000395194 BAIAP3O94812 1187 aa22.31■■□□□ 1.16
COL11A2-204ENST00000395194 CCND2P30279 289 aa22.31■■□□□ 1.16
COL11A2-204ENST00000395194 DEFB103AP81534 67 aa22.31■■□□□ 1.16
COL11A2-204ENST00000395194 MRPS5P82675 430 aaKnown RBP22.31■■□□□ 1.16
COL11A2-204ENST00000395194 CELF3Q5SZQ8 465 aaKnown RBP22.31■■□□□ 1.16
COL11A2-204ENST00000395194 VSIG10LQ86VR7 867 aa22.31■■□□□ 1.16
COL11A2-204ENST00000395194 BRWD1Q9NSI6 2320 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 MICAL3Q7RTP6 2002 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 LCHNA4D1U4 455 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 HAS3O00219 553 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 TNFRSF10AO00220 468 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 ANTXR2P58335 489 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 TROAPQ12815 778 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 HIC1Q14526 733 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 SART3Q15020 963 aaKnown RBP22.3■■□□□ 1.16
COL11A2-204ENST00000395194 ADAMTS19Q8TE59 1207 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 MYL10Q9BUA6 226 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 BCAS3Q9H6U6 928 aa22.3■■□□□ 1.16
COL11A2-204ENST00000395194 MAP3K20Q9NYL2 800 aaKnown RBP22.3■■□□□ 1.16
COL11A2-204ENST00000395194 PNMA6FA0A0J9YX94 578 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 SGSM2O43147 1006 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 GTPBP6O43824 516 aaPredicted RBP22.29■■□□□ 1.16
COL11A2-204ENST00000395194 TFF2Q03403 129 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 ZNF618Q5T7W0 954 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 CNKSR3Q6P9H4 555 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 CATIPQ7Z7H3 387 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 IL27Q8NEV9 243 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 MLXIPQ9HAP2 919 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 MTCH2Q9Y6C9 303 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 KAT6AQ92794 2004 aa22.29■■□□□ 1.16
COL11A2-204ENST00000395194 HOXD8P13378 290 aaPredicted RBP22.28■■□□□ 1.16
COL11A2-204ENST00000395194 RBL2Q08999 1139 aa22.28■■□□□ 1.16
COL11A2-204ENST00000395194 PTK7Q13308 1070 aa22.28■■□□□ 1.16
COL11A2-204ENST00000395194 TRIM71Q2Q1W2 868 aaKnown RBP22.28■■□□□ 1.16
COL11A2-204ENST00000395194 FAM117BQ6P1L5 589 aa22.28■■□□□ 1.16
COL11A2-204ENST00000395194 KCNV1Q6PIU1 500 aa22.28■■□□□ 1.16
COL11A2-204ENST00000395194 MB21D2Q8IYB1 491 aaPredicted RBP22.28■■□□□ 1.16
COL11A2-204ENST00000395194 ZBED2Q9BTP6 218 aa22.28■■□□□ 1.16
COL11A2-204ENST00000395194 TSPYL2Q9H2G4 693 aaPredicted RBP22.28■■□□□ 1.16
COL11A2-204ENST00000395194 RBM8AQ9Y5S9 174 aaKnown RBP22.28■■□□□ 1.16
COL11A2-204ENST00000395194 BDP1A6H8Y1 2624 aa22.28■■□□□ 1.16
COL11A2-204ENST00000395194 PPFIA4O75335 1185 aa22.27■■□□□ 1.16
COL11A2-204ENST00000395194 CXCL10P02778 98 aa22.27■■□□□ 1.16
COL11A2-204ENST00000395194 MBTPS1Q14703 1052 aa22.27■■□□□ 1.16
COL11A2-204ENST00000395194 TRAF7Q6Q0C0 670 aa22.27■■□□□ 1.16
COL11A2-204ENST00000395194 UHRF1Q96T88 793 aaPredicted RBP22.27■■□□□ 1.16
COL11A2-204ENST00000395194 MTUS1Q9ULD2 1270 aa22.27■■□□□ 1.16
COL11A2-204ENST00000395194 MRPS9P82933 396 aaKnown RBP22.26■■□□□ 1.15
COL11A2-204ENST00000395194 TRAF1Q13077 416 aa22.26■■□□□ 1.15
COL11A2-204ENST00000395194 SAMD3Q8N6K7 520 aa22.26■■□□□ 1.15
COL11A2-204ENST00000395194 IGDCC4Q8TDY8 1250 aa22.26■■□□□ 1.15
COL11A2-204ENST00000395194 NECAB3Q96P71 396 aaPredicted RBP22.26■■□□□ 1.15
COL11A2-204ENST00000395194 C16orf70Q9BSU1 422 aa22.26■■□□□ 1.15
COL11A2-204ENST00000395194 RTEL1Q9NZ71 1219 aa22.26■■□□□ 1.15
COL11A2-204ENST00000395194 SIP14410 1827 aa22.26■■□□□ 1.15
COL11A2-204ENST00000395194 LGALS2P05162 132 aa22.25■■□□□ 1.15
COL11A2-204ENST00000395194 THPOP40225 353 aa22.25■■□□□ 1.15
COL11A2-204ENST00000395194 GRB10Q13322 594 aa22.25■■□□□ 1.15
COL11A2-204ENST00000395194 ZNF654Q8IZM8 581 aa22.25■■□□□ 1.15
COL11A2-204ENST00000395194 NOP56O00567 594 aaKnown RBP22.24■■□□□ 1.15
COL11A2-204ENST00000395194 PARNO95453 639 aaKnown RBP22.24■■□□□ 1.15
COL11A2-204ENST00000395194 TGFB3P10600 412 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 KCNQ1P51787 676 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 SP4Q02446 784 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 GNPTABQ3T906 1256 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 USP17L6PQ6QN14 398 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 CYFIP1Q7L576 1253 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 RAB11FIP4Q86YS3 637 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 GDPD5Q8WTR4 605 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 MAP4K1Q92918 833 aa22.24■■□□□ 1.15
COL11A2-204ENST00000395194 LY9Q9HBG7 655 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms