RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
HERC4-203ENST00000395185 MCTP2Q6DN12 878 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 MCTP1Q6DN14 999 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 IQSEC1Q6DN90 963 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 ARMCX2Q7L311 632 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 TRPV1Q8NER1 839 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 DNERQ8NFT8 737 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 BICD2Q8TD16 824 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 BBXQ8WY36 941 aaPredicted RBP9.66□□□□□ -0.86
HERC4-203ENST00000395185 USP28Q96RU2 1077 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 SENP6Q9GZR1 1112 aaPredicted RBP9.66□□□□□ -0.86
HERC4-203ENST00000395185 AP5M1Q9H0R1 490 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 PSTPIP2Q9H939 334 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 XPNPEP3Q9NQH7 507 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.66□□□□□ -0.86
HERC4-203ENST00000395185 POLR3EQ9NVU0 708 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 RLFQ13129 1914 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 ATAD5Q96QE3 1844 aa9.66□□□□□ -0.86
HERC4-203ENST00000395185 ELP1O95163 1332 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 SOWAHBA6NEL2 793 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 FAM205CA6NFA0 338 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 NFIBO00712 420 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 ZEB2O60315 1214 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 DUSP11O75319 330 aaKnown RBP9.65□□□□□ -0.86
HERC4-203ENST00000395185 HSD17B4P51659 736 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 ADCY7P51828 1080 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 RPS6P62753 249 aaKnown RBP9.65□□□□□ -0.86
HERC4-203ENST00000395185 TNFAIP2Q03169 654 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 NFKBIBQ15653 356 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 ANO1Q5XXA6 986 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 KRT25Q7Z3Z0 450 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 UBE2Q1Q7Z7E8 422 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 C4orf32Q8N8J7 132 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 LINC00301Q8NCQ3 95 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 NSUN6Q8TEA1 469 aaKnown RBP9.65□□□□□ -0.86
HERC4-203ENST00000395185 TBC1D5Q92609 795 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 CUL5Q93034 780 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 VTI1AQ96AJ9 217 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 ZNF396Q96N95 335 aaPredicted RBP9.65□□□□□ -0.86
HERC4-203ENST00000395185 GBP4Q96PP9 640 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 IWS1Q96ST2 819 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 SCAND2PQ9GZW5 306 aaPredicted RBP9.65□□□□□ -0.86
HERC4-203ENST00000395185 LMBRD1Q9NUN5 540 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
HERC4-203ENST00000395185 CFAP45Q9UL16 551 aa9.65□□□□□ -0.86
HERC4-203ENST00000395185 GCOM1H8Y6P7 765 aaPredicted RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 WNT7AO00755 349 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 YEATS4O95619 227 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 FOSP01100 380 aaPredicted RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 POLR2MP0CAP2 368 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 TAL1P17542 331 aaPredicted RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 KRT85P78386 507 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 CCDC144BQ3MJ40 725 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 BRDTQ58F21 947 aaPredicted RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 GJC2Q5T442 439 aaPredicted RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 ARHGEF16Q5VV41 709 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 REXO1Q8N1G1 1221 aaKnown RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 PCSK9Q8NBP7 692 aaKnown RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 RASGRP4Q8TDF6 673 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 LEO1Q8WVC0 666 aaPredicted RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 MBOAT7Q96N66 472 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 RMDN3Q96TC7 470 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 TSEN34Q9BSV6 310 aaKnown RBP9.64□□□□□ -0.87
HERC4-203ENST00000395185 BRMS1Q9HCU9 246 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 VTA1Q9NP79 307 aa9.64□□□□□ -0.87
HERC4-203ENST00000395185 CYP3A7-CYP3A51PA0A087WV96 503 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 PPP1R37O75864 691 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 CFBP00751 764 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 CYP3A4P08684 503 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 CYP3A7P24462 503 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 CIITAP33076 1130 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 ALDH5A1P51649 535 aaPredicted RBP9.63□□□□□ -0.87
HERC4-203ENST00000395185 USP11P51784 963 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 AP3B2Q13367 1082 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 ORC2Q13416 577 aaPredicted RBP9.63□□□□□ -0.87
HERC4-203ENST00000395185 LRRC41Q15345 812 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 STXBP2Q15833 593 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 GNASQ5JWF2 1037 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 AXDND1Q5T1B0 1012 aaPredicted RBP9.63□□□□□ -0.87
HERC4-203ENST00000395185 USP17L6PQ6QN14 398 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 PIK3AP1Q6ZUJ8 805 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 EEPD1Q7L9B9 569 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 DIS3LQ8TF46 1054 aaKnown RBP9.63□□□□□ -0.87
HERC4-203ENST00000395185 PGBD1Q96JS3 809 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 FTOQ9C0B1 505 aaKnown RBP eCLIP9.63□□□□□ -0.87
HERC4-203ENST00000395185 TMEM260Q9NX78 707 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 PRKAG2Q9UGJ0 569 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 Q9Y3F1 56 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 PCDHB6Q9Y5E3 794 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 CLIC4Q9Y696 253 aa9.63□□□□□ -0.87
HERC4-203ENST00000395185 PTPRFP10586 1907 aa9.62□□□□□ -0.87
HERC4-203ENST00000395185 FRMPD4Q14CM0 1322 aa9.62□□□□□ -0.87
HERC4-203ENST00000395185 FAM237AA0A1B0GTK4 181 aa9.62□□□□□ -0.87
HERC4-203ENST00000395185 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
HERC4-203ENST00000395185 NKRFO15226 690 aaKnown RBP eCLIP9.62□□□□□ -0.87
HERC4-203ENST00000395185 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
HERC4-203ENST00000395185 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
HERC4-203ENST00000395185 PPP6R2O75170 966 aa9.62□□□□□ -0.87
HERC4-203ENST00000395185 EIF3JO75822 258 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms