RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CCNYQ8ND76 341 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 HOMER3Q9NSC5 361 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 AATKQ6ZMQ8 1374 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 RGS12O14924 1447 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 ARHGEF37A1IGU5 675 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 GOLGA8SH3BPF8 625 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 KIF3CO14782 793 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 HEXIM1O94992 359 aaKnown RBP11.29□□□□□ -0.6
COL4A6-203ENST00000394872 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-203ENST00000394872 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 JADE1Q6IE81 842 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 ZNF449Q6P9G9 518 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 EIF3CLB5ME19 914 aaKnown RBP11.29□□□□□ -0.6
COL4A6-203ENST00000394872 GOLGA8KD6RF30 607 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 MMP10P09238 476 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 TCP1P17987 556 aaKnown RBP11.29□□□□□ -0.6
COL4A6-203ENST00000394872 RUNDC3BQ96NL0 473 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 EIF3CQ99613 913 aaKnown RBP11.29□□□□□ -0.6
COL4A6-203ENST00000394872 LRRC4Q9HBW1 653 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 UBN1Q9NPG3 1134 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 KLHL14Q9P2G3 628 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 STK17AQ9UEE5 414 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 IGSF1Q8N6C5 1336 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 PALLDQ8WX93 1383 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 PDXDC2PQ6P474 469 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 PIGBQ92521 554 aa11.29□□□□□ -0.6
COL4A6-203ENST00000394872 MAGED2Q9UNF1 606 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-203ENST00000394872 ATP7BP35670 1465 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 LRRN2O75325 713 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 SRGAP2CP0DJJ0 459 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 BRD3Q15059 726 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 MAP3K21Q5TCX8 1036 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 PLEKHF1Q96S99 279 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 ACTN1P12814 892 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 ARHGAP4P98171 946 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 EHHADHQ08426 723 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 RAB44Q7Z6P3 723 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 P2RX5Q93086 422 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 DHTKD1Q96HY7 919 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 FAM81BQ96LP2 452 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 NCAPGQ9BPX3 1015 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 PUS7LQ9H0K6 701 aaKnown RBP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 ATG3Q9NT62 314 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 HOXA13P31271 388 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 ELF1P32519 619 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 LMNB2Q03252 620 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 C2orf69Q8N8R5 385 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 IRAK4Q9NWZ3 460 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 SUSD4Q5VX71 490 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 FAM71BQ8TC56 605 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 HAUS4Q9H6D7 363 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 EPN1Q9Y6I3 576 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 USP6P35125 1406 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 CYP2D7A0A087X1C5 515 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 A0A1B0GUA9 196 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 EIF2AK2P19525 551 aaKnown RBP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 CDK8P49336 464 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 TMCO4Q5TGY1 634 aa11.28□□□□□ -0.6
COL4A6-203ENST00000394872 GBP7Q8N8V2 638 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-203ENST00000394872 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 INHBAP08476 426 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 SPDYE6P0CI01 402 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 SIX6OS1Q8N1H7 587 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 HVCN1Q96D96 273 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 CYP21A2P08686 494 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 KRT10P13645 584 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 ARL4AP40617 200 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 DSTYKQ6XUX3 929 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 ANKRD13CQ8N6S4 541 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 NLRP4Q96MN2 994 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 GSDMAQ96QA5 445 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 BSDC1Q9NW68 430 aaPredicted RBP11.27□□□□□ -0.6
COL4A6-203ENST00000394872 STAP2Q9UGK3 403 aa11.27□□□□□ -0.6
COL4A6-203ENST00000394872 POC1B-GALNT4F8VUJ3 575 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 DDIT3P35638 169 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 PDE1BQ01064 536 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 MMEL1Q495T6 779 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 SMYD4Q8IYR2 804 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-203ENST00000394872 MCUQ8NE86 351 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 UBE2TQ9NPD8 197 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-203ENST00000394872 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 BAG5Q9UL15 447 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 SH2B2O14492 632 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-203ENST00000394872 GNGT1P63211 74 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 SLC39A14Q15043 492 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 TMTC4Q5T4D3 741 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-203ENST00000394872 RNF139Q8WU17 664 aa11.27□□□□□ -0.61
COL4A6-203ENST00000394872 PNMA6FA0A0J9YX94 578 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms