RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 RCCD1A6NED2 376 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 WNT7AO00755 349 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 MEFVO15553 781 aaPredicted RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 TUBBP07437 444 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 CYP2D6P10635 497 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 HERC4Q5GLZ8 1057 aaPredicted RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 ARMC3Q5W041 872 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 TBC1D9BQ66K14 1250 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 VSIG1Q86XK7 387 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 GSDMAQ96QA5 445 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 CELF4Q9BZC1 486 aaKnown RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 TRIM6Q9C030 488 aaPredicted RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 ERVV-1B6SEH8 477 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 CHUKO15111 745 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 FMNL1O95466 1100 aaPredicted RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 GYS1P13807 737 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 DNM2P50570 870 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 TMEM139Q8IV31 216 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 ZSCAN29Q8IWY8 852 aaPredicted RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 ZBTB10Q96DT7 871 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 LIMA1Q9UHB6 759 aaKnown RBP9.69□□□□□ -0.86
RTN4-206ENST00000394611 AMACRQ9UHK6 382 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 USH1CQ9Y6N9 552 aa9.69□□□□□ -0.86
RTN4-206ENST00000394611 MAP2K7O14733 419 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 CHMP2AO43633 222 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 ADRA2BP18089 450 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 UAP1Q16222 522 aaPredicted RBP9.68□□□□□ -0.86
RTN4-206ENST00000394611 SNX29Q8TEQ0 813 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 NIP7Q9Y221 180 aaKnown RBP eCLIP9.68□□□□□ -0.86
RTN4-206ENST00000394611 VEGFAP15692 232 aaPredicted RBP9.68□□□□□ -0.86
RTN4-206ENST00000394611 PLCG1P19174 1290 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 CAVIN4Q5BKX8 364 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 CCDC13Q8IYE1 715 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 ARHGEF2Q92974 986 aaKnown RBP9.68□□□□□ -0.86
RTN4-206ENST00000394611 ANKIB1Q9P2G1 1089 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 FRMPD2Q68DX3 1309 aaPredicted RBP9.68□□□□□ -0.86
RTN4-206ENST00000394611 ADD2P35612 726 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 ZNF131P52739 623 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 POLE2P56282 527 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 SNX1Q13596 522 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 SLC40A1Q9NP59 571 aa9.68□□□□□ -0.86
RTN4-206ENST00000394611 RGS16O15492 202 aaPredicted RBP9.67□□□□□ -0.86
RTN4-206ENST00000394611 DAPK3O43293 454 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 ACTN4O43707 911 aaKnown RBP9.67□□□□□ -0.86
RTN4-206ENST00000394611 LRRN2O75325 713 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 CALM1P0DP23 149 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 CALM2P0DP24 149 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 CALM3P0DP25 149 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 ZNF76P36508 570 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 TFAP4Q01664 338 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 RASGRF1Q13972 1273 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 TRIM14Q14142 442 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 TEX2Q8IWB9 1127 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 RETREG2Q8NC44 543 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 CCDC51Q96ER9 411 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 DYNLL2Q96FJ2 89 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 ZBTB21Q9ULJ3 1066 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.67□□□□□ -0.86
RTN4-206ENST00000394611 SPDYE3A6NKU9 549 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 GTPBP6O43824 516 aaPredicted RBP9.67□□□□□ -0.86
RTN4-206ENST00000394611 DIAPH2O60879 1101 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 PPP1R37O75864 691 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 ACSL3O95573 720 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 IFNAR1P17181 557 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
RTN4-206ENST00000394611 DIXDC1Q155Q3 683 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 SFMBT2Q5VUG0 894 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 HVCN1Q96D96 273 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 ZNF219Q9P2Y4 722 aaPredicted RBP9.67□□□□□ -0.86
RTN4-206ENST00000394611 SNX24Q9Y343 169 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 BCORQ6W2J9 1755 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 WDR91A4D1P6 747 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 HERVK_113P62684 666 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 CYP4A11Q02928 519 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 TMEM266Q2M3C6 531 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 TRIML1Q8N9V2 468 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 SUPT20HQ8NEM7 779 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 SPIRE2Q8WWL2 714 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 TRIM51Q9BSJ1 452 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 AFDNP55196 1824 aaKnown RBP9.67□□□□□ -0.86
RTN4-206ENST00000394611 POTEMA6NI47 508 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 H7C1D1 291 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 GLI1P08151 1106 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 TCP1P17987 556 aaKnown RBP9.67□□□□□ -0.86
RTN4-206ENST00000394611 AMPD3Q01432 767 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 VPS36Q86VN1 386 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 ZNF34Q8IZ26 560 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 SLC44A5Q8NCS7 719 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 SLC17A8Q8NDX2 589 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 FLAD1Q8NFF5 587 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 KLHL29Q96CT2 875 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 ISCA1Q9BUE6 129 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 FBXL5Q9UKA1 691 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 ZNF652Q9Y2D9 606 aa9.67□□□□□ -0.86
RTN4-206ENST00000394611 BICDL2A1A5D9 508 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 CNGA1P29973 690 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 KIF5BP33176 963 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 NFIXQ14938 502 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 TSGA10IPQ3SY00 556 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms