RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 GCOM1H8Y6P7 765 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 STAM2O75886 525 aa20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 POLR2MP0CAP2 368 aa20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 PDE4AP27815 886 aa20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 SART3Q15020 963 aaKnown RBP20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 TRIM71Q2Q1W2 868 aaKnown RBP20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 IL27Q8NEV9 243 aa20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 MAP3K14Q99558 947 aa20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 FRMPD4Q14CM0 1322 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 IFIT3O14879 490 aaKnown RBP20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 TLL1O43897 1013 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 NBNO60934 754 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 MYCLP12524 364 aaPredicted RBP20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 CHMLP26374 656 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 CCND2P30279 289 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 SLC35G1Q2M3R5 365 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 HSDL1Q3SXM5 330 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 TRAF7Q6Q0C0 670 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 NCOA7Q8NI08 942 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 SPATA33Q96N06 139 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 LMCD1Q9NZU5 365 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 COG5Q9UP83 839 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 BDP1A6H8Y1 2624 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 MYH7BA7E2Y1 1941 aa20.27■□□□□ 0.84
SNRPA1-202ENST00000394082 EMSYQ7Z589 1322 aa20.27■□□□□ 0.83
SNRPA1-202ENST00000394082 CYTH3O43739 400 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 GGPS1O95749 300 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 ZNF286BP0CG31 522 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 BMP1P13497 986 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 UBA1P22314 1058 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 HOXA13P31271 388 aaPredicted RBP20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 HOXC8P31273 242 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 RALYLQ86SE5 291 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 PIGSQ96S52 555 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 UHRF1Q96T88 793 aaPredicted RBP20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 C16orf70Q9BSU1 422 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 ALG1Q9BT22 464 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 MTA3Q9BTC8 594 aa20.26■□□□□ 0.83
SNRPA1-202ENST00000394082 PTPRSQ13332 1948 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 PRRC2BQ5JSZ5 2229 aaKnown RBP20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 EPOPA6NHQ4 379 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 GJB5O95377 273 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 SMARCA1P28370 1054 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 ICAM3P32942 547 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 SP2Q02086 613 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 PTH1RQ03431 593 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 IKBKEQ14164 716 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 WTAPQ15007 396 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 GNPTABQ3T906 1256 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 SERINC5Q86VE9 423 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 HOMER1Q86YM7 354 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 IL31RAQ8NI17 732 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 ARNTL2Q8WYA1 636 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 RAD9AQ99638 391 aa20.25■□□□□ 0.83
SNRPA1-202ENST00000394082 E7EWF7 191 aa20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 RFXAPO00287 272 aa20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 SGSM2O43147 1006 aa20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 ARHGEF15O94989 841 aa20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 ZNF618Q5T7W0 954 aa20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 IGDCC4Q8TDY8 1250 aa20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 INPP4AQ96PE3 977 aaPredicted RBP20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 MLXIPQ9HAP2 919 aa20.24■□□□□ 0.83
SNRPA1-202ENST00000394082 H3BRB1 525 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 LPXNO60711 386 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 CAND2O75155 1236 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 NEDD9Q14511 834 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 XRRA1Q6P2D8 792 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 MICALL1Q8N3F8 863 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 MAP4K1Q92918 833 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 ZBED2Q9BTP6 218 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 USP26Q9BXU7 913 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 TUT1Q9H6E5 874 aaKnown RBP20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 CERS4Q9HA82 394 aa20.23■□□□□ 0.83
SNRPA1-202ENST00000394082 SPATA31C2B4DYI2 1134 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 LGR5O75473 907 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 ERVK-21P61565 698 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 DEFB103AP81534 67 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 MRPS9P82933 396 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 GRB10Q13322 594 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 MKRN4PQ13434 485 aaPredicted RBP20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 MBTPS1Q14703 1052 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 METTL7BQ6UX53 244 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 FCHSD1Q86WN1 690 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 WNT8BQ93098 351 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 SPZ1Q9BXG8 430 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 SENP2Q9HC62 589 aa20.22■□□□□ 0.83
SNRPA1-202ENST00000394082 PIK3CDO00329 1044 aa20.21■□□□□ 0.83
SNRPA1-202ENST00000394082 FIBPO43427 364 aa20.21■□□□□ 0.83
SNRPA1-202ENST00000394082 ZNF200P98182 395 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-202ENST00000394082 HIC1Q14526 733 aa20.21■□□□□ 0.83
SNRPA1-202ENST00000394082 MB21D2Q8IYB1 491 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-202ENST00000394082 SENP7Q9BQF6 1050 aa20.21■□□□□ 0.83
SNRPA1-202ENST00000394082 LZTS2Q9BRK4 669 aa20.21■□□□□ 0.83
SNRPA1-202ENST00000394082 BAZ2BQ9UIF8 2168 aaKnown RBP20.21■□□□□ 0.83
SNRPA1-202ENST00000394082 C17orf102A2RUQ5 167 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 LCHNA4D1U4 455 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 RSPH10B2B2RC85 870 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 DDAH1O94760 285 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms