RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 PNMA6FA0A0J9YX94 578 aa21.52■■□□□ 1.03
UBTF-203ENST00000393606 KRT86O43790 486 aa21.52■■□□□ 1.03
UBTF-203ENST00000393606 SYF2O95926 243 aaKnown RBP21.52■■□□□ 1.03
UBTF-203ENST00000393606 CENPPQ6IPU0 288 aa21.52■■□□□ 1.03
UBTF-203ENST00000393606 UNC13DQ70J99 1090 aa21.52■■□□□ 1.03
UBTF-203ENST00000393606 HAS1Q92839 578 aa21.52■■□□□ 1.03
UBTF-203ENST00000393606 DEF6Q9H4E7 631 aa21.52■■□□□ 1.03
UBTF-203ENST00000393606 SKIDA1Q1XH10 827 aa21.51■■□□□ 1.03
UBTF-203ENST00000393606 CRACR2AQ9BSW2 395 aa21.51■■□□□ 1.03
UBTF-203ENST00000393606 NLRC4Q9NPP4 1024 aa21.51■■□□□ 1.03
UBTF-203ENST00000393606 AFF2P51816 1311 aa21.51■■□□□ 1.03
UBTF-203ENST00000393606 MYBL2P10244 700 aa21.51■■□□□ 1.03
UBTF-203ENST00000393606 MEA1Q16626 185 aa21.51■■□□□ 1.03
UBTF-203ENST00000393606 PCDHA12Q9UN75 941 aa21.51■■□□□ 1.03
UBTF-203ENST00000393606 KIAA1024Q9UPX6 916 aa21.51■■□□□ 1.03
UBTF-203ENST00000393606 PDE2AO00408 941 aaPredicted RBP21.5■■□□□ 1.03
UBTF-203ENST00000393606 FXR2P51116 673 aaKnown RBP eCLIP21.5■■□□□ 1.031e-6■■■■□ 22.1
UBTF-203ENST00000393606 CUL5Q93034 780 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 NUP58Q9BVL2 599 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 ARHGAP20Q9P2F6 1191 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 ESYT2A0FGR8 921 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 LRRC53A6NM62 1247 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 TUBBP07437 444 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 CXCR5P32302 372 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 EIF4A3P38919 411 aaKnown RBP21.5■■□□□ 1.03
UBTF-203ENST00000393606 NT5C2P49902 561 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 PAPD7Q5XG87 772 aaKnown RBP21.5■■□□□ 1.03
UBTF-203ENST00000393606 RAB34Q9BZG1 259 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 RIC8AQ9NPQ8 531 aa21.5■■□□□ 1.03
UBTF-203ENST00000393606 TRAF5O00463 557 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 MATR3P43243 847 aaKnown RBP eCLIP21.49■■□□□ 1.03
UBTF-203ENST00000393606 DNA2P51530 1060 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 SPA17Q15506 151 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 LRRC31Q6UY01 552 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.49■■□□□ 1.03
UBTF-203ENST00000393606 GPATCH11Q8N954 259 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 ACBD3Q9H3P7 528 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 MED4Q9NPJ6 270 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 GEMIN8Q9NWZ8 242 aaKnown RBP21.49■■□□□ 1.03
UBTF-203ENST00000393606 SMARCAL1Q9NZC9 954 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 HPCAL4Q9UM19 191 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 MOCS3O95396 460 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 ADRA2BP18089 450 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 ARID5AQ03989 594 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 KIF5AQ12840 1032 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 YY1AP1Q9H869 796 aa21.49■■□□□ 1.03
UBTF-203ENST00000393606 POTEB3A0JP26 581 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 POTECB2RU33 542 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 IVLP07476 585 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 SMARCA1P28370 1054 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 C2orf54Q08AI8 447 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 USH1GQ495M9 461 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 MSL1Q68DK7 614 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 POTEBQ6S5H4 581 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 AKR1B10O60218 316 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 SNHG28P0DPA3 235 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 HOXA10P31260 410 aaPredicted RBP21.48■■□□□ 1.03
UBTF-203ENST00000393606 IKQ13123 557 aaPredicted RBP21.48■■□□□ 1.03
UBTF-203ENST00000393606 SP8Q8IXZ3 490 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 ERGIC2Q96RQ1 377 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 CRAMP1Q96RY5 1269 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 IFIH1Q9BYX4 1025 aaKnown RBP21.48■■□□□ 1.03
UBTF-203ENST00000393606 COA1Q9GZY4 146 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 PANK4Q9NVE7 773 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 STK17AQ9UEE5 414 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 CAPN6Q9Y6Q1 641 aa21.48■■□□□ 1.03
UBTF-203ENST00000393606 ADAMTSL1Q8N6G6 1762 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 EIF3CLB5ME19 914 aaKnown RBP21.47■■□□□ 1.03
UBTF-203ENST00000393606 MEIS1O00470 390 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 ZBTB5O15062 677 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 NOVP48745 357 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 COASYQ13057 564 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 CACNA2D4Q7Z3S7 1137 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 TMC4Q7Z404 712 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 EIF3CQ99613 913 aaKnown RBP21.47■■□□□ 1.03
UBTF-203ENST00000393606 EHD2Q9NZN4 543 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 PCDHA1Q9Y5I3 950 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 GDF11O95390 407 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 MRPL12P52815 198 aaKnown RBP21.47■■□□□ 1.03
UBTF-203ENST00000393606 CCDC40Q4G0X9 1142 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 APOBEC3HQ6NTF7 200 aaKnown RBP21.47■■□□□ 1.03
UBTF-203ENST00000393606 ZNF622Q969S3 477 aaKnown RBP eCLIP21.47■■□□□ 1.034e-7■■□□□ 13.3
UBTF-203ENST00000393606 SIK3Q9Y2K2 1263 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 ATP6V0A2Q9Y487 856 aa21.47■■□□□ 1.03
UBTF-203ENST00000393606 HLA-DOAP06340 250 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 EEF2P13639 858 aaKnown RBP21.46■■□□□ 1.03
UBTF-203ENST00000393606 SLC1A4P43007 532 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 KIF11P52732 1056 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 NAP1L1P55209 391 aaKnown RBP21.46■■□□□ 1.03
UBTF-203ENST00000393606 GFPT1Q06210 699 aaPredicted RBP21.46■■□□□ 1.03
UBTF-203ENST00000393606 QRICH1Q2TAL8 776 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 DNAJC18Q9H819 358 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 JRKLQ9Y4A0 524 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 PCDHA13Q9Y5I0 950 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 LY75O60449 1722 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 NCK2O43639 380 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 BUB1O43683 1085 aa21.46■■□□□ 1.03
UBTF-203ENST00000393606 PRPF6O94906 941 aaKnown RBP21.46■■□□□ 1.03
UBTF-203ENST00000393606 GGCXP38435 758 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms