RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TRMT1LQ7Z2T5 733 aaKnown RBP13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 SIAH1Q8IUQ4 282 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 SH3GLB2Q9NR46 395 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 QSER1Q2KHR3 1735 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 TRAF5O00463 557 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 GH2P01242 217 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 NOA1Q8NC60 698 aaKnown RBP13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 SPZ1Q9BXG8 430 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 TMEM39BQ9GZU3 492 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 BMP2KQ9NSY1 1161 aaPredicted RBP13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 ZNF70Q9UC06 446 aaPredicted RBP13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 DUSP10Q9Y6W6 482 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 TGFB2P61812 414 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 CT47A1Q5JQC4 288 aaPredicted RBP13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 CNNM4Q6P4Q7 775 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 RRAGAQ7L523 313 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 FAM114A1Q8IWE2 563 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 C4orf32Q8N8J7 132 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 SMCR8Q8TEV9 937 aaPredicted RBP13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 ABCB6Q9NP58 842 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 LCMT1Q9UIC8 334 aa13.42□□□□□ -0.26
CAPRIN1-202ENST00000389645 IBSPP21815 317 aaPredicted RBP13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 RASSF7Q02833 373 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 IRF2BP1Q8IU81 584 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 ADGRF4Q8IZF3 695 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 LZTS2Q9BRK4 669 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 EHD4Q9H223 541 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L10C9JJH3 530 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 NFKBIEO00221 500 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 TULP2O00295 520 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCNE1P24864 410 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 EEF1GP26641 437 aaKnown RBP13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 NT5C2P49902 561 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 KRT83P78385 493 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 PNKPQ96T60 521 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 TBC1D8O95759 1140 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 CXCR5P32302 372 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 RNASE9P60153 205 aaKnown RBP13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 ZNF543Q08ER8 600 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 PTPROQ16827 1216 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 ABCB5Q2M3G0 1257 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 USH1GQ495M9 461 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCDC181Q5TID7 509 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 NOC3LQ8WTT2 800 aaKnown RBP13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 LARP4BQ92615 738 aaKnown RBP13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 JMJD4Q9H9V9 463 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 HDAC9Q9UKV0 1011 aa13.41□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L15C9J2P7 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L13C9JLJ4 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L11C9JVI0 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L18D6R9N7 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L22D6RA61 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L17D6RBQ6 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L19D6RCP7 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L20D6RJB6 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 SLC37A4O43826 429 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 PLEKP08567 350 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 PBX1P40424 430 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L24Q0WX57 530 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 GALNT17Q6IS24 598 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 USP17L6PQ6QN14 398 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCDC155Q8N6L0 562 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 GOLGA6L1Q8N7Z2 621 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 NHEJ1Q9H9Q4 299 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 TMOD2Q9NZR1 351 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 SAR1BQ9Y6B6 198 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 MYH8P13535 1937 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 ANKRD65E5RJM6 399 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 ATP1A1P05023 1023 aaKnown RBP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 TAL1P17542 331 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 VSNL1P62760 191 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 ICA1Q05084 483 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 LRRC15Q8TF66 581 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCDC17Q96LX7 622 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCSER1Q9C0I3 900 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 ZMYND12Q9H0C1 365 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.265e-6■■■■□ 23
CAPRIN1-202ENST00000389645 ZNF185O15231 689 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 PPP1R11O60927 126 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 TATDN1Q6P1N9 297 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 GSPT2Q8IYD1 628 aaKnown RBP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 GIMAP8Q8ND71 665 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 TSG101Q99816 390 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 NUDT12Q9BQG2 462 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 KBTBD4Q9NVX7 518 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 GJA3Q9Y6H8 435 aa13.4□□□□□ -0.26
CAPRIN1-202ENST00000389645 PLIN4Q96Q06 1357 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 M0R2N6 131 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 EIF3JO75822 258 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 RHOBTB3O94955 611 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
CAPRIN1-202ENST00000389645 SLC1A4P43007 532 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms