RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 TRIM71Q2Q1W2 868 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 CELF3Q5SZQ8 465 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 CYB5R4Q7L1T6 521 aa20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 EXOC6Q8TAG9 804 aa20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 ZBED2Q9BTP6 218 aa20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 IL25Q9H293 177 aa20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 RIOX1Q9H6W3 641 aa20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 LMCD1Q9NZU5 365 aa20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 NCOR1O75376 2440 aa20.76■□□□□ 0.91
RPUSD3-201ENST00000383820 ZNF286BP0CG31 522 aa20.75■□□□□ 0.91
RPUSD3-201ENST00000383820 TFF2Q03403 129 aa20.75■□□□□ 0.91
RPUSD3-201ENST00000383820 GRB10Q13322 594 aa20.75■□□□□ 0.91
RPUSD3-201ENST00000383820 IKBKEQ14164 716 aa20.75■□□□□ 0.91
RPUSD3-201ENST00000383820 GRM4Q14833 912 aa20.75■□□□□ 0.91
RPUSD3-201ENST00000383820 SPATA33Q96N06 139 aa20.75■□□□□ 0.91
RPUSD3-201ENST00000383820 U3KPZ7 1027 aaPredicted RBP20.75■□□□□ 0.91
RPUSD3-201ENST00000383820 MUC3AQ02505 3323 aa20.75■□□□□ 0.91
RPUSD3-201ENST00000383820 GCOM1H8Y6P7 765 aaPredicted RBP20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 GJB5O95377 273 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 GGPS1O95749 300 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 POLR2MP0CAP2 368 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 COL9A1P20849 921 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 CCND2P30279 289 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 DEFB103AP81534 67 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 HSDL1Q3SXM5 330 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 TRAF7Q6Q0C0 670 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 RUFY2Q8WXA3 655 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 RAD9AQ99638 391 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 EMSYQ7Z589 1322 aa20.74■□□□□ 0.91
RPUSD3-201ENST00000383820 ERICH2A1L162 156 aa20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 LPXNO60711 386 aa20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 UBA1P22314 1058 aaKnown RBP20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 HOXA13P31271 388 aaPredicted RBP20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 ZNF618Q5T7W0 954 aa20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 HOMER1Q86YM7 354 aa20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 IL31RAQ8NI17 732 aa20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 PIGSQ96S52 555 aa20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 COL4A4P53420 1690 aaPredicted RBP20.73■□□□□ 0.91
RPUSD3-201ENST00000383820 TCF20Q9UGU0 1960 aaKnown RBP20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 PNMA6FA0A0J9YX94 578 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 LCHNA4D1U4 455 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 IFIT3O14879 490 aaKnown RBP20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 STAM2O75886 525 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 CYP21A2P08686 494 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 KCNQ1P51787 676 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 SP2Q02086 613 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 SLC35G1Q2M3R5 365 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 KRT40Q6A162 431 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 SERINC5Q86VE9 423 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 HLA-CQ95604 372 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 C16orf70Q9BSU1 422 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 MLXIPQ9HAP2 919 aa20.72■□□□□ 0.91
RPUSD3-201ENST00000383820 REV3LO60673 3130 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 LGR5O75473 907 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 GSPT1P15170 499 aaKnown RBP20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 ERVK-21P61565 698 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 ZNF200P98182 395 aaPredicted RBP20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 TROAPQ12815 778 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 MBTPS1Q14703 1052 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 SART3Q15020 963 aaKnown RBP20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 TCTN1Q2MV58 587 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 GNPTABQ3T906 1256 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 WNT8BQ93098 351 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 TGS1Q96RS0 853 aaKnown RBP20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 FRMPD4Q14CM0 1322 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 BDP1A6H8Y1 2624 aa20.71■□□□□ 0.91
RPUSD3-201ENST00000383820 H3BRB1 525 aa20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 CYTH3O43739 400 aa20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 HOXC8P31273 242 aa20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 WTAPQ15007 396 aa20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 SPRED2Q7Z698 418 aa20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 TMCO2Q7Z6W1 182 aaPredicted RBP20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 RALYLQ86SE5 291 aaKnown RBP20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 FCHSD1Q86WN1 690 aa20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 NCOA7Q8NI08 942 aa20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 NECAB3Q96P71 396 aaPredicted RBP20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 TUT1Q9H6E5 874 aaKnown RBP20.7■□□□□ 0.9
RPUSD3-201ENST00000383820 C17orf102A2RUQ5 167 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 RSPH10B2B2RC85 870 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 CAND2O75155 1236 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 RSPH10BP0C881 870 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 PDE4AP27815 886 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 ICAM3P32942 547 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 HIC1Q14526 733 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 INPP4AQ96PE3 977 aaPredicted RBP20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 C1QTNF1Q9BXJ1 281 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 INSL6Q9Y581 213 aa20.69■□□□□ 0.9
RPUSD3-201ENST00000383820 LINC01553A4QN01 128 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 SORBS3O60504 671 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 LGALS2P05162 132 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 CHMLP26374 656 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 THPOP40225 353 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 PTH1RQ03431 593 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 MKRN4PQ13434 485 aaPredicted RBP20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 NEDD9Q14511 834 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 GDPD5Q8WTR4 605 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 GPKOWQ92917 476 aaPredicted RBP eCLIP20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 ATP6V0A1Q93050 837 aa20.68■□□□□ 0.9
RPUSD3-201ENST00000383820 MAP3K14Q99558 947 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms