RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ATP2A2P16615 1042 aaKnown RBP15.01□□□□□ -0.01
RPAIN-202ENST00000381208 MCM5P33992 734 aa15.01□□□□□ -0.01
RPAIN-202ENST00000381208 PBX2P40425 430 aa15.01□□□□□ -0.01
RPAIN-202ENST00000381208 RBL2Q08999 1139 aa15.01□□□□□ -0.01
RPAIN-202ENST00000381208 C7orf31Q8N865 590 aa15.01□□□□□ -0.01
RPAIN-202ENST00000381208 RRP36Q96EU6 259 aaKnown RBP15.01□□□□□ -0.01
RPAIN-202ENST00000381208 SLC9A7Q96T83 725 aa15.01□□□□□ -0.01
RPAIN-202ENST00000381208 SEC63Q9UGP8 760 aaKnown RBP15.01□□□□□ -0.01
RPAIN-202ENST00000381208 CDH23Q9H251 3354 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 BAIAP3O94812 1187 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 CALM1P0DP23 149 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 CALM2P0DP24 149 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 CALM3P0DP25 149 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 HOXA13P31271 388 aaPredicted RBP15□□□□□ -0.01
RPAIN-202ENST00000381208 LIFRP42702 1097 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 PSEN2P49810 448 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 CELF3Q5SZQ8 465 aaKnown RBP15□□□□□ -0.01
RPAIN-202ENST00000381208 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 XRRA1Q6P2D8 792 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 DEFB128Q7Z7B8 93 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 ZNF654Q8IZM8 581 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 KAT2BQ92831 832 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 CUL5Q93034 780 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 FTOQ9C0B1 505 aaKnown RBP eCLIP15□□□□□ -0.01
RPAIN-202ENST00000381208 GTF2IRD1Q9UHL9 959 aa15□□□□□ -0.01
RPAIN-202ENST00000381208 CCDC69A6NI79 296 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 KIF28PB7ZC32 967 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 HAS3O00219 553 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 SELPP16109 830 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 ANTXR2P58335 489 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 CHMP4BP1P59074 171 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 SLC35G1Q2M3R5 365 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 RNF20Q5VTR2 975 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 NFXL1Q6ZNB6 911 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 FCHSD1Q86WN1 690 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 SYMPKQ92797 1274 aaKnown RBP14.99□□□□□ -0.01
RPAIN-202ENST00000381208 SPATA33Q96N06 139 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 ESYT1Q9BSJ8 1104 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 LSG1Q9H089 658 aaKnown RBP14.99□□□□□ -0.01
RPAIN-202ENST00000381208 LY9Q9HBG7 655 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 FRMPD4Q14CM0 1322 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 KIAA1217Q5T5P2 1943 aa14.99□□□□□ -0.01
RPAIN-202ENST00000381208 PRC1O43663 620 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 EFCAB14O75071 495 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 RGS20O76081 388 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 GGPS1O95749 300 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 ICAM3P32942 547 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 PTK7Q13308 1070 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 NEDD9Q14511 834 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 MFSD10Q14728 455 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 KIAA0753Q2KHM9 967 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 BMP2KLQ5H9B9 411 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 PPP2R2DQ66LE6 453 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 GDF6Q6KF10 455 aaPredicted RBP14.98□□□□□ -0.01
RPAIN-202ENST00000381208 TEX2Q8IWB9 1127 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 VWCEQ96DN2 955 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 NKX2-4Q9H2Z4 354 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 MLXIPQ9HAP2 919 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 SENP2Q9HC62 589 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 HDAC6Q9UBN7 1215 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 BAZ2BQ9UIF8 2168 aaKnown RBP14.98□□□□□ -0.01
RPAIN-202ENST00000381208 PIK3CDO00329 1044 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 SH2B2O14492 632 aaPredicted RBP14.98□□□□□ -0.01
RPAIN-202ENST00000381208 FIBPO43427 364 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 UBA1P22314 1058 aaKnown RBP14.98□□□□□ -0.01
RPAIN-202ENST00000381208 KCNJ6P48051 423 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 LRRC8DQ7L1W4 858 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 CENPQQ7L2Z9 268 aaPredicted RBP14.98□□□□□ -0.01
RPAIN-202ENST00000381208 INPP4AQ96PE3 977 aaPredicted RBP14.98□□□□□ -0.01
RPAIN-202ENST00000381208 PRDM12Q9H4Q4 367 aa14.98□□□□□ -0.01
RPAIN-202ENST00000381208 UNC80Q8N2C7 3258 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 NOP56O00567 594 aaKnown RBP14.97□□□□□ -0.01
RPAIN-202ENST00000381208 SLC27A2O14975 620 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 NECTIN1Q15223 517 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 HSDL1Q3SXM5 330 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 CREB3L3Q68CJ9 461 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 METTL7BQ6UX53 244 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 SYNE3Q6ZMZ3 975 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 GIMAP8Q8ND71 665 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-202ENST00000381208 IL31RAQ8NI17 732 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 SMARCC2Q8TAQ2 1214 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 CDHR1Q96JP9 859 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 SENP7Q9BQF6 1050 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 ALG1Q9BT22 464 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 COL25A1Q9BXS0 654 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-202ENST00000381208 USP26Q9BXU7 913 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 ANO2Q9NQ90 1003 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 YBX2Q9Y2T7 364 aaKnown RBP14.97□□□□□ -0.01
RPAIN-202ENST00000381208 SLC12A7Q9Y666 1083 aa14.97□□□□□ -0.01
RPAIN-202ENST00000381208 CXCL10P02778 98 aa14.96□□□□□ -0.02
RPAIN-202ENST00000381208 ZNF286BP0CG31 522 aa14.96□□□□□ -0.02
RPAIN-202ENST00000381208 GNAT1P11488 350 aa14.96□□□□□ -0.02
RPAIN-202ENST00000381208 CKBP12277 381 aa14.96□□□□□ -0.02
RPAIN-202ENST00000381208 PCNX4Q63HM2 1172 aa14.96□□□□□ -0.02
RPAIN-202ENST00000381208 CNKSR3Q6P9H4 555 aa14.96□□□□□ -0.02
RPAIN-202ENST00000381208 NLRX1Q86UT6 975 aa14.96□□□□□ -0.02
RPAIN-202ENST00000381208 SGMS1Q86VZ5 419 aa14.96□□□□□ -0.02
RPAIN-202ENST00000381208 TSPYL2Q9H2G4 693 aaPredicted RBP14.96□□□□□ -0.02
RPAIN-202ENST00000381208 EMSYQ7Z589 1322 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms