RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 IL31RAQ8NI17 732 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 CTCFLQ8NI51 663 aaPredicted RBP19.95■□□□□ 0.78
HMGN1-204ENST00000380749 PPM1EQ8WY54 764 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 SPATA33Q96N06 139 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 ALG1Q9BT22 464 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 HDAC6Q9UBN7 1215 aa19.95■□□□□ 0.78
HMGN1-204ENST00000380749 SIP14410 1827 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 RGS20O76081 388 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 GGPS1O95749 300 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 TGFB3P10600 412 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 HOXD8P13378 290 aaPredicted RBP19.94■□□□□ 0.78
HMGN1-204ENST00000380749 MYOGP15173 224 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 UBA1P22314 1058 aaKnown RBP19.94■□□□□ 0.78
HMGN1-204ENST00000380749 KIF5BP33176 963 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 KCNJ6P48051 423 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 ANTXR2P58335 489 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 RBL2Q08999 1139 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 ADGRE1Q14246 886 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 GNPTABQ3T906 1256 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 MYSM1Q5VVJ2 828 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 PHOSPHO2Q8TCD6 241 aa19.94■□□□□ 0.78
HMGN1-204ENST00000380749 KIF28PB7ZC32 967 aa19.93■□□□□ 0.78
HMGN1-204ENST00000380749 CA3P07451 260 aa19.93■□□□□ 0.78
HMGN1-204ENST00000380749 TJAP1Q5JTD0 557 aa19.93■□□□□ 0.78
HMGN1-204ENST00000380749 CELF3Q5SZQ8 465 aaKnown RBP19.93■□□□□ 0.78
HMGN1-204ENST00000380749 ZNF654Q8IZM8 581 aa19.93■□□□□ 0.78
HMGN1-204ENST00000380749 CTAGE1Q96RT6 745 aa19.93■□□□□ 0.78
HMGN1-204ENST00000380749 MAP3K14Q99558 947 aa19.93■□□□□ 0.78
HMGN1-204ENST00000380749 THEGQ9P2T0 379 aa19.93■□□□□ 0.78
HMGN1-204ENST00000380749 SEC63Q9UGP8 760 aaKnown RBP19.93■□□□□ 0.78
HMGN1-204ENST00000380749 FRMPD4Q14CM0 1322 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 TCF20Q9UGU0 1960 aaKnown RBP19.92■□□□□ 0.78
HMGN1-204ENST00000380749 HAS3O00219 553 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 PPFIA4O75335 1185 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 IGDCC4Q8TDY8 1250 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 PIBF1Q8WXW3 757 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 DHX38Q92620 1227 aaKnown RBP19.92■□□□□ 0.78
HMGN1-204ENST00000380749 RRP36Q96EU6 259 aaKnown RBP19.92■□□□□ 0.78
HMGN1-204ENST00000380749 MTA3Q9BTC8 594 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 SPZ1Q9BXG8 430 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 MLXIPQ9HAP2 919 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 LY9Q9HBG7 655 aa19.92■□□□□ 0.78
HMGN1-204ENST00000380749 PRC1O43663 620 aa19.91■□□□□ 0.78
HMGN1-204ENST00000380749 SORBS3O60504 671 aa19.91■□□□□ 0.78
HMGN1-204ENST00000380749 STAM2O75886 525 aa19.91■□□□□ 0.78
HMGN1-204ENST00000380749 PTK7Q13308 1070 aa19.91■□□□□ 0.78
HMGN1-204ENST00000380749 HSDL1Q3SXM5 330 aa19.91■□□□□ 0.78
HMGN1-204ENST00000380749 HERC6Q8IVU3 1022 aa19.91■□□□□ 0.78
HMGN1-204ENST00000380749 CUL5Q93034 780 aa19.91■□□□□ 0.78
HMGN1-204ENST00000380749 NOP56O00567 594 aaKnown RBP19.9■□□□□ 0.78
HMGN1-204ENST00000380749 CKBP12277 381 aa19.9■□□□□ 0.78
HMGN1-204ENST00000380749 MCM5P33992 734 aa19.9■□□□□ 0.78
HMGN1-204ENST00000380749 CCDC85BQ15834 202 aaPredicted RBP19.9■□□□□ 0.78
HMGN1-204ENST00000380749 CNKSR3Q6P9H4 555 aa19.9■□□□□ 0.78
HMGN1-204ENST00000380749 NFXL1Q6ZNB6 911 aa19.9■□□□□ 0.78
HMGN1-204ENST00000380749 TMEM87BQ96K49 555 aa19.9■□□□□ 0.78
HMGN1-204ENST00000380749 LZTS2Q9BRK4 669 aa19.9■□□□□ 0.78
HMGN1-204ENST00000380749 PRDM6Q9NQX0 595 aa19.9■□□□□ 0.78
HMGN1-204ENST00000380749 CCDC69A6NI79 296 aa19.89■□□□□ 0.77
HMGN1-204ENST00000380749 SMARCA1P28370 1054 aa19.89■□□□□ 0.77
HMGN1-204ENST00000380749 GNAQP50148 359 aa19.89■□□□□ 0.77
HMGN1-204ENST00000380749 TMTC2Q8N394 836 aa19.89■□□□□ 0.77
HMGN1-204ENST00000380749 SMARCC2Q8TAQ2 1214 aa19.89■□□□□ 0.77
HMGN1-204ENST00000380749 ATXN2LQ8WWM7 1075 aaKnown RBP19.89■□□□□ 0.77
HMGN1-204ENST00000380749 MYL10Q9BUA6 226 aa19.89■□□□□ 0.77
HMGN1-204ENST00000380749 TSPYL2Q9H2G4 693 aaPredicted RBP19.89■□□□□ 0.77
HMGN1-204ENST00000380749 NLRC5Q86WI3 1866 aa19.89■□□□□ 0.77
HMGN1-204ENST00000380749 GTPBP6O43824 516 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-204ENST00000380749 TLL1O43897 1013 aa19.88■□□□□ 0.77
HMGN1-204ENST00000380749 EFCAB14O75071 495 aa19.88■□□□□ 0.77
HMGN1-204ENST00000380749 CXCL10P02778 98 aa19.88■□□□□ 0.77
HMGN1-204ENST00000380749 WDR5P61964 334 aaKnown RBP19.88■□□□□ 0.77
HMGN1-204ENST00000380749 SP2Q02086 613 aa19.88■□□□□ 0.77
HMGN1-204ENST00000380749 NEDD9Q14511 834 aa19.88■□□□□ 0.77
HMGN1-204ENST00000380749 MICALL1Q8N3F8 863 aa19.88■□□□□ 0.77
HMGN1-204ENST00000380749 GPKOWQ92917 476 aaPredicted RBP eCLIP19.88■□□□□ 0.772e-6■■■■□ 20.4
HMGN1-204ENST00000380749 ZFP91Q96JP5 570 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-204ENST00000380749 INPP4AQ96PE3 977 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-204ENST00000380749 LSG1Q9H089 658 aaKnown RBP19.88■□□□□ 0.77
HMGN1-204ENST00000380749 SH2B2O14492 632 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-204ENST00000380749 FIBPO43427 364 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 CALM1P0DP23 149 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 CALM2P0DP24 149 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 CALM3P0DP25 149 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 ICAM3P32942 547 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 MRPS9P82933 396 aaKnown RBP19.87■□□□□ 0.77
HMGN1-204ENST00000380749 METTL7BQ6UX53 244 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 ESYT1Q9BSJ8 1104 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 C16orf70Q9BSU1 422 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 EMSYQ7Z589 1322 aa19.87■□□□□ 0.77
HMGN1-204ENST00000380749 C17orf102A2RUQ5 167 aa19.86■□□□□ 0.77
HMGN1-204ENST00000380749 H3BRB1 525 aa19.86■□□□□ 0.77
HMGN1-204ENST00000380749 PIK3CDO00329 1044 aa19.86■□□□□ 0.77
HMGN1-204ENST00000380749 SLC27A2O14975 620 aa19.86■□□□□ 0.77
HMGN1-204ENST00000380749 NBNO60934 754 aa19.86■□□□□ 0.77
HMGN1-204ENST00000380749 LGALS2P05162 132 aa19.86■□□□□ 0.77
HMGN1-204ENST00000380749 TRIM71Q2Q1W2 868 aaKnown RBP19.86■□□□□ 0.77
HMGN1-204ENST00000380749 XRRA1Q6P2D8 792 aa19.86■□□□□ 0.77
HMGN1-204ENST00000380749 LOXHD1Q8IVV2 1947 aa19.86■□□□□ 0.77
HMGN1-204ENST00000380749 IL27Q8NEV9 243 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms