RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 USP17L6PQ6QN14 398 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 ZFPM1Q8IX07 1006 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 CRAMP1Q96RY5 1269 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 PANK4Q9NVE7 773 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 PSD3Q9NYI0 1048 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 SNX12Q9UMY4 172 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 MYH7BA7E2Y1 1941 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 TRAF5O00463 557 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 ZBTB5O15062 677 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 RAD21O60216 631 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 LCA5LO95447 670 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 TNNT3P45378 269 aaPredicted RBP13.47□□□□□ -0.25
RFC3-201ENST00000380071 MRPL12P52815 198 aaKnown RBP13.47□□□□□ -0.25
RFC3-201ENST00000380071 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
RFC3-201ENST00000380071 CDC42EP5Q6NZY7 148 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 NELFCDQ8IXH7 590 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 TRIM58Q8NG06 486 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 IQCDQ96DY2 449 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 TRERF1Q96PN7 1200 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 PSMB7Q99436 277 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 NLRC4Q9NPP4 1024 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 KIAA1024Q9UPX6 916 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 GOLGB1Q14789 3259 aaKnown RBP13.46□□□□□ -0.25
RFC3-201ENST00000380071 THSD7AQ9UPZ6 1657 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 ABCB11O95342 1321 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 TARSL2A2RTX5 802 aaKnown RBP13.46□□□□□ -0.25
RFC3-201ENST00000380071 POLRMTO00411 1230 aaKnown RBP13.46□□□□□ -0.25
RFC3-201ENST00000380071 PPEF1O14829 653 aaPredicted RBP13.46□□□□□ -0.25
RFC3-201ENST00000380071 TACC1O75410 805 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.25
RFC3-201ENST00000380071 CXCR5P32302 372 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 MAGEA1P43355 309 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 MRPS25P82663 173 aaKnown RBP13.46□□□□□ -0.25
RFC3-201ENST00000380071 APBA1Q02410 837 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 RAD51AP2Q09MP3 1159 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 NFIAQ12857 509 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 EZH2Q15910 746 aaKnown RBP13.46□□□□□ -0.25
RFC3-201ENST00000380071 ZCWPW2Q504Y3 356 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 PDXDC1Q6P996 788 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 TSG101Q99816 390 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 COA1Q9GZY4 146 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 SMARCAL1Q9NZC9 954 aa13.46□□□□□ -0.25
RFC3-201ENST00000380071 TULP2O00295 520 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 FKBP3Q00688 224 aaKnown RBP13.45□□□□□ -0.26
RFC3-201ENST00000380071 RASSF7Q02833 373 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 ZSCAN26Q16670 478 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 ASTE1Q2TB18 679 aaPredicted RBP13.45□□□□□ -0.26
RFC3-201ENST00000380071 HGSNATQ68CP4 663 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 PPP1R18Q6NYC8 613 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 NFRKBQ6P4R8 1299 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 CCNI2Q6ZMN8 369 aaPredicted RBP13.45□□□□□ -0.26
RFC3-201ENST00000380071 CACNA2D4Q7Z3S7 1137 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 HDAC7Q8WUI4 952 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 GJD4Q96KN9 370 aaPredicted RBP13.45□□□□□ -0.26
RFC3-201ENST00000380071 LRRC27Q9C0I9 530 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
RFC3-201ENST00000380071 COL4A3BPQ9Y5P4 624 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 POTEB3A0JP26 581 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 FAM196BA6NMK8 535 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 POTECB2RU33 542 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 NCK2O43639 380 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 NOL4O94818 638 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 CAPN2P17655 700 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 STAT3P40763 770 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 FAM26FQ5R3K3 315 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 POTEBQ6S5H4 581 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 FAM71BQ8TC56 605 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 RIN2Q8WYP3 895 aaPredicted RBP13.45□□□□□ -0.26
RFC3-201ENST00000380071 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 CRACR2AQ9BSW2 395 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
RFC3-201ENST00000380071 HPCAL4Q9UM19 191 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 PCDHA2Q9Y5H9 948 aa13.45□□□□□ -0.26
RFC3-201ENST00000380071 MATR3P43243 847 aaKnown RBP eCLIP13.44□□□□□ -0.26
RFC3-201ENST00000380071 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
RFC3-201ENST00000380071 APOBEC3HQ6NTF7 200 aaKnown RBP13.44□□□□□ -0.26
RFC3-201ENST00000380071 LRRC1Q9BTT6 524 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 PCDHAC2Q9Y5I4 1007 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 ZC3H4Q9UPT8 1303 aaKnown RBP13.44□□□□□ -0.26
RFC3-201ENST00000380071 UBR3Q6ZT12 1888 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 KLRG2A4D1S0 409 aaPredicted RBP13.44□□□□□ -0.26
RFC3-201ENST00000380071 UBAP1LF5GYI3 381 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 BUB1O43683 1085 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 TLR2O60603 784 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 PLA2G4BP0C869 781 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 MCM3P25205 808 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 SLC1A4P43007 532 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 CACNB3P54284 484 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 MUM1L1Q5H9M0 696 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 HYIQ5T013 277 aa13.44□□□□□ -0.26
RFC3-201ENST00000380071 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms