RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 CST5P28325 142 aaPredicted RBP5.4□□□□□ -1.54
C9orf72-203ENST00000380003 TMEM62Q0P6H9 643 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 GPNMBQ14956 572 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 UTP14CQ5TAP6 766 aaKnown RBP5.4□□□□□ -1.54
C9orf72-203ENST00000380003 C1orf53Q5VUE5 145 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 HEATR3Q7Z4Q2 680 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 CATIPQ7Z7H3 387 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 TMEM199Q8N511 208 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 GJA10Q969M2 543 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 CCDC136Q96JN2 1154 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 PPP1R16BQ96T49 567 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 PDCD2LQ9BRP1 358 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 CNNM2Q9H8M5 875 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 NRBP1Q9UHY1 535 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 SYNPO2Q9UMS6 1093 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 SPEGQ15772 3267 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 POTEMA6NI47 508 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 DDX39AO00148 427 aaKnown RBP5.4□□□□□ -1.54
C9orf72-203ENST00000380003 UPP2O95045 317 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 UBA1P22314 1058 aaKnown RBP5.4□□□□□ -1.54
C9orf72-203ENST00000380003 EDNRBP24530 442 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 ADD1P35611 737 aaKnown RBP5.4□□□□□ -1.54
C9orf72-203ENST00000380003 CPT1AP50416 773 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 DEFB103AP81534 67 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 SKIV2LQ15477 1246 aaKnown RBP5.4□□□□□ -1.54
C9orf72-203ENST00000380003 TKFCQ3LXA3 575 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 CASC1Q6TDU7 716 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 RUFY2Q8WXA3 655 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 ARNTL2Q8WYA1 636 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 SETD4Q9NVD3 440 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 STXBP5LQ9Y2K9 1186 aa5.4□□□□□ -1.54
C9orf72-203ENST00000380003 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.4□□□□□ -1.55
C9orf72-203ENST00000380003 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.4□□□□□ -1.55
C9orf72-203ENST00000380003 CCDC69A6NI79 296 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 A6NJR5 290 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 IGBP1P78318 339 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 MYSM1Q5VVJ2 828 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 C7orf31Q8N865 590 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 MTG1Q9BT17 334 aaPredicted RBP5.4□□□□□ -1.55
C9orf72-203ENST00000380003 MLXIPQ9HAP2 919 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 SLC28A3Q9HAS3 691 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 TMEM260Q9NX78 707 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 GINS2Q9Y248 185 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 MRPL11Q9Y3B7 192 aaKnown RBP5.4□□□□□ -1.55
C9orf72-203ENST00000380003 DOCK5Q9H7D0 1870 aa5.4□□□□□ -1.55
C9orf72-203ENST00000380003 GCOM1H8Y6P7 765 aaPredicted RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 MEIS2O14770 477 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 TREHO43280 583 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 IQCF3P0C7M6 154 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 POLR2MP0CAP2 368 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 ATP2A2P16615 1042 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 CDC27P30260 824 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 CCT2P78371 535 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 GRM4Q14833 912 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 NECTIN1Q15223 517 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 DNERQ8NFT8 737 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 CTCFLQ8NI51 663 aaPredicted RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 RASGRP4Q8TDF6 673 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 DHX38Q92620 1227 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 PHKBQ93100 1093 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 ZNF668Q96K58 619 aaPredicted RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 RNPEPQ9H4A4 650 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 NCOA5Q9HCD5 579 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 RAPGEFL1Q9UHV5 662 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 SLC12A7Q9Y666 1083 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 V9GY48 417 aaPredicted RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 MYH7BA7E2Y1 1941 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 WDR19Q8NEZ3 1342 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 TLR3O15455 904 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 NBNO60934 754 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 EIF3JO75822 258 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 PCP11498 1178 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 THPOP40225 353 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 FGD1P98174 961 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 APOBRQ0VD83 1088 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 SEMA3FQ13275 785 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 MBTPS1Q14703 1052 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 SART3Q15020 963 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 PPP4R3BQ5MIZ7 849 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 ZNF618Q5T7W0 954 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 PPP2R2DQ66LE6 453 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 VSIG10LQ86VR7 867 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 SLC43A3Q8NBI5 491 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 SMARCC2Q8TAQ2 1214 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 MORC4Q8TE76 937 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 TRAPPC12Q8WVT3 735 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 ANKS1AQ92625 1134 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 SH2D3AQ9BRG2 576 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 UPF3BQ9BZI7 483 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 RIOX1Q9H6W3 641 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 IL23AQ9NPF7 189 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 SLC4A7Q9Y6M7 1214 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 TCF20Q9UGU0 1960 aaKnown RBP5.39□□□□□ -1.55
C9orf72-203ENST00000380003 MROH7Q68CQ1 1323 aa5.39□□□□□ -1.55
C9orf72-203ENST00000380003 PNMA6FA0A0J9YX94 578 aa5.38□□□□□ -1.55
C9orf72-203ENST00000380003 NOP56O00567 594 aaKnown RBP5.38□□□□□ -1.55
C9orf72-203ENST00000380003 SH2B2O14492 632 aaPredicted RBP5.38□□□□□ -1.55
C9orf72-203ENST00000380003 ZEB2O60315 1214 aa5.38□□□□□ -1.55
C9orf72-203ENST00000380003 GH1P01241 217 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms