RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LAMC2Q13753 1193 aa20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 EP400NLQ6ZTU2 488 aa20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 SPATA33Q96N06 139 aa20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 LAMA4Q16363 1823 aa20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 MICAL3Q7RTP6 2002 aa20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 EIF3JO75822 258 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 AMHP03971 560 aa20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 IL9P15248 144 aa20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 MFAP1P55081 439 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 HIC1Q14526 733 aa20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 TRIM71Q2Q1W2 868 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 TRAF7Q6Q0C0 670 aa20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 ZSCAN10Q96SZ4 725 aaPredicted RBP20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 JMJD4Q9H9V9 463 aa20.72■□□□□ 0.91
PDLIM4-202ENST00000379018 GPR37L1O60883 481 aa20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 GGPS1O95749 300 aa20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 HOXA13P31271 388 aaPredicted RBP20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 CCDC178Q5BJE1 867 aa20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 ENAHQ8N8S7 591 aaPredicted RBP20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 DBF4BQ8NFT6 615 aa20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 EMID1Q96A84 441 aaPredicted RBP20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 UIMC1Q96RL1 719 aa20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 INSL6Q9Y581 213 aa20.71■□□□□ 0.91
PDLIM4-202ENST00000379018 RSPH10B2B2RC85 870 aa20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 HAS3O00219 553 aa20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 UPP2O95045 317 aa20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 CTSHP09668 335 aa20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 RSPH10BP0C881 870 aa20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 SDSP20132 328 aa20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 PTCRAQ6ISU1 281 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 CWC27Q6UX04 472 aaKnown RBP20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 GJD3Q8N144 294 aa20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 STAG2Q8N3U4 1231 aa20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-202ENST00000379018 PI4K2BG5E9Z4 385 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 H3BQ06 376 aaPredicted RBP20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 RRP1P56182 461 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 HSDL1Q3SXM5 330 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 LEXMQ3ZCV2 418 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 B4GALNT3Q6L9W6 998 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 FAM178BQ8IXR5 827 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 IL31RAQ8NI17 732 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 GPKOWQ92917 476 aaPredicted RBP eCLIP20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 PDCD2LQ9BRP1 358 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 AMNQ9BXJ7 453 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 DIAPH3Q9NSV4 1193 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 EMSYQ7Z589 1322 aa20.69■□□□□ 0.9
PDLIM4-202ENST00000379018 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 C17orf102A2RUQ5 167 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 OPLAHO14841 1288 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 RGS20O76081 388 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 UBA1P22314 1058 aaKnown RBP20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 CELF3Q5SZQ8 465 aaKnown RBP20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 MYSM1Q5VVJ2 828 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 HOMER1Q86YM7 354 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 ATP6V0A1Q93050 837 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 YME1L1Q96TA2 773 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 MAF1Q9H063 256 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 MLXIPQ9HAP2 919 aa20.68■□□□□ 0.9
PDLIM4-202ENST00000379018 MUC6Q6W4X9 2439 aa20.67■□□□□ 0.9
PDLIM4-202ENST00000379018 HSD17B4P51659 736 aa20.67■□□□□ 0.9
PDLIM4-202ENST00000379018 PGM5Q15124 567 aa20.67■□□□□ 0.9
PDLIM4-202ENST00000379018 EPC2Q52LR7 807 aa20.67■□□□□ 0.9
PDLIM4-202ENST00000379018 IFIT1BQ5T764 474 aaKnown RBP20.67■□□□□ 0.9
PDLIM4-202ENST00000379018 FCHSD1Q86WN1 690 aa20.67■□□□□ 0.9
PDLIM4-202ENST00000379018 ZSWIM5Q9P217 1185 aa20.67■□□□□ 0.9
PDLIM4-202ENST00000379018 PCDHA1Q9Y5I3 950 aa20.67■□□□□ 0.9
PDLIM4-202ENST00000379018 PPP1R11O60927 126 aaPredicted RBP20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 PPFIA4O75335 1185 aa20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 CSPG5O95196 566 aa20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 SP2Q02086 613 aa20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 PTPROQ16827 1216 aa20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 IMMTQ16891 758 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 SERINC5Q86VE9 423 aa20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 ANKS1AQ92625 1134 aa20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 MRPL38Q96DV4 380 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 ARIH1Q9Y4X5 557 aaPredicted RBP20.66■□□□□ 0.9
PDLIM4-202ENST00000379018 MYO7AQ13402 2215 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 BAZ2BQ9UIF8 2168 aaKnown RBP20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 NLRC5Q86WI3 1866 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 KLRF2D3W0D1 207 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 TREHO43280 583 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 SMIM10L2AP0DMW4 78 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 SMIM10L2BP0DMW5 78 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 CCND2P30279 289 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 GPM6BQ13491 265 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 HDAC1Q13547 482 aaPredicted RBP20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 CSPP1Q1MSJ5 1256 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 KCNV1Q6PIU1 500 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 SEPT8Q92599 483 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 C16orf70Q9BSU1 422 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 OSBPL7Q9BZF2 842 aa20.65■□□□□ 0.9
PDLIM4-202ENST00000379018 DOCK5Q9H7D0 1870 aa20.64■□□□□ 0.9
PDLIM4-202ENST00000379018 NOP56O00567 594 aaKnown RBP20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 ZBTB5O15062 677 aa20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 LGALS2P05162 132 aa20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 HOXD8P13378 290 aaPredicted RBP20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 HTRA4P83105 476 aaPredicted RBP20.64■□□□□ 0.89
PDLIM4-202ENST00000379018 TIGD5Q53EQ6 642 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms