RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 TTLL7Q6ZT98 887 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 SPATA5Q8NB90 893 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 ENGASEQ8NFI3 743 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.85□□□□□ -0.35
NPHS1-202ENST00000378910 PUS7LQ9H0K6 701 aaKnown RBP12.85□□□□□ -0.35
NPHS1-202ENST00000378910 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 USP6P35125 1406 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 CCNT1O60563 726 aaKnown RBP12.85□□□□□ -0.35
NPHS1-202ENST00000378910 MAP3K7CLP57077 242 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 TBC1D25Q3MII6 688 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 C2CD2Q9Y426 696 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 GLI2P10070 1586 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 ARHGEF40Q8TER5 1519 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 ANKRD33BA6NCL7 494 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 NR1D1P20393 614 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 VSIG1Q86XK7 387 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 ABHD8Q96I13 439 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 ABHD10Q9NUJ1 306 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 QRICH2Q9H0J4 1663 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 FOXN1O15353 648 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 ZNF24P17028 368 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 PDE6CP51160 858 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 EHHADHQ08426 723 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 PTPROQ16827 1216 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 EMBQ6PCB8 327 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 CROCCP2Q86T23 111 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 STMN2Q93045 179 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 CNOT6LQ96LI5 555 aaKnown RBP12.85□□□□□ -0.35
NPHS1-202ENST00000378910 OSBPL10Q9BXB5 764 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 LRWD1Q9UFC0 647 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 ZNF148Q9UQR1 794 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 CASP1P29466 404 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 USP14P54578 494 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 RASSF7Q02833 373 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 PPARAQ07869 468 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 PI16Q6UXB8 463 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 DNAJC14Q6Y2X3 702 aaPredicted RBP12.84□□□□□ -0.35
NPHS1-202ENST00000378910 CABLES1Q8TDN4 633 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 PAGE5Q96GU1 130 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 MRPL44Q9H9J2 332 aaKnown RBP12.84□□□□□ -0.35
NPHS1-202ENST00000378910 DLGAP2Q9P1A6 1054 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 RGS16O15492 202 aaPredicted RBP12.84□□□□□ -0.35
NPHS1-202ENST00000378910 CTNNA2P26232 953 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 UBE3CQ15386 1083 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 HSP90AA5PQ58FG0 334 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 BZW1Q7L1Q6 419 aaKnown RBP12.84□□□□□ -0.35
NPHS1-202ENST00000378910 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 SALL3Q9BXA9 1300 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 SEMA3EO15041 775 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 ATP4AP20648 1035 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 ZBED6P86452 979 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 DENND2CQ68D51 928 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 GALNT17Q6IS24 598 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 DPH5Q9H2P9 285 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 CTTNBP2NLQ9P2B4 639 aa12.84□□□□□ -0.35
NPHS1-202ENST00000378910 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 KRIT1O00522 736 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 FSBPO95073 299 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 IGKV5-2P06315 115 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 METTL16Q86W50 562 aaKnown RBP12.83□□□□□ -0.36
NPHS1-202ENST00000378910 WDR60Q8WVS4 1066 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 KLHL29Q96CT2 875 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 NONOQ15233 471 aaKnown RBP eCLIP12.83□□□□□ -0.36
NPHS1-202ENST00000378910 ZNF658Q5TYW1 1059 aaPredicted RBP12.83□□□□□ -0.36
NPHS1-202ENST00000378910 RAB3IL1Q8TBN0 382 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 RNF26Q9BY78 433 aaPredicted RBP12.83□□□□□ -0.36
NPHS1-202ENST00000378910 NRDE2Q9H7Z3 1164 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 NHEJ1Q9H9Q4 299 aaPredicted RBP12.83□□□□□ -0.36
NPHS1-202ENST00000378910 SUGCTQ9HAC7 445 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 IQGAP1P46940 1657 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 ATP5DP30049 168 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 PSMD6Q15008 389 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 SEL1L2Q5TEA6 688 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 NELFCDQ8IXH7 590 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.36
NPHS1-202ENST00000378910 TC2NQ8N9U0 490 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 SNX29Q8TEQ0 813 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 STAMBPL1Q96FJ0 436 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
NPHS1-202ENST00000378910 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
NPHS1-202ENST00000378910 ZSCAN9O15535 394 aaPredicted RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 MOCS3O95396 460 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 ATP2A2P16615 1042 aaKnown RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 RPL13P26373 211 aaKnown RBP12.82□□□□□ -0.36
NPHS1-202ENST00000378910 CDC25AP30304 524 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 SERPINB4P48594 390 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 TCP11X2Q5H9J9 407 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 BLIDQ8IZY5 108 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 HVCN1Q96D96 273 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 RAB17Q9H0T7 212 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 PRM3Q9NNZ6 103 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 ATXN10Q9UBB4 475 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 C15orf41Q9Y2V0 281 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
NPHS1-202ENST00000378910 TSPAN9O75954 239 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms