RNA–Protein interactions for RNA: ENST00000378595.7

AFF4-203, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best) BASIC

Gene AFF4, Length 3,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-203ENST00000378595 KRT14P02533 472 aa13.1□□□□□ -0.31
AFF4-203ENST00000378595 AKR1B1P15121 316 aa13.1□□□□□ -0.31
AFF4-203ENST00000378595 GNGT1P63211 74 aa13.1□□□□□ -0.31
AFF4-203ENST00000378595 ADAM9Q13443 819 aa13.1□□□□□ -0.31
AFF4-203ENST00000378595 TAX1BP1Q86VP1 789 aa13.1□□□□□ -0.31
AFF4-203ENST00000378595 DDX60Q8IY21 1712 aaKnown RBP13.09□□□□□ -0.31
AFF4-203ENST00000378595 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
AFF4-203ENST00000378595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
AFF4-203ENST00000378595 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 POTECB2RU33 542 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 GDF11O95390 407 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 VWA3BQ502W6 1294 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 MSL1Q68DK7 614 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 TTI2Q6NXR4 508 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 KCNK18Q7Z418 384 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 MYOCDQ8IZQ8 938 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 DUSP9Q99956 384 aaKnown RBP13.09□□□□□ -0.31
AFF4-203ENST00000378595 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
AFF4-203ENST00000378595 SEMA6BQ9H3T3 888 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 ORC4O43929 436 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 VAV2P52735 878 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
AFF4-203ENST00000378595 NOX5Q96PH1 765 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 UTRNP46939 3433 aa13.09□□□□□ -0.31
AFF4-203ENST00000378595 LTBP4Q8N2S1 1624 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 ZNF263O14978 683 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 GPSM2P81274 684 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 PDCLQ13371 301 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 SLC9C1Q4G0N8 1177 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 CFAP58Q5T655 872 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 TMED8Q6PL24 325 aaPredicted RBP13.08□□□□□ -0.31
AFF4-203ENST00000378595 CCNI2Q6ZMN8 369 aaPredicted RBP13.08□□□□□ -0.31
AFF4-203ENST00000378595 GIMAP8Q8ND71 665 aaPredicted RBP13.08□□□□□ -0.31
AFF4-203ENST00000378595 DNAJC7Q99615 494 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 CD209Q9NNX6 404 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 PPANQ9NQ55 473 aaKnown RBP13.08□□□□□ -0.31
AFF4-203ENST00000378595 MKRN1Q9UHC7 482 aaKnown RBP13.08□□□□□ -0.31
AFF4-203ENST00000378595 PCDHA1Q9Y5I3 950 aa13.08□□□□□ -0.31
AFF4-203ENST00000378595 AGPSO00116 658 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 PPFIA4O75335 1185 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 PRPF6O94906 941 aaKnown RBP13.08□□□□□ -0.32
AFF4-203ENST00000378595 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.32
AFF4-203ENST00000378595 MAGEA9P43362 315 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 ARHGAP44Q17R89 818 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 ZFYVE27Q5T4F4 411 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 SFMBT2Q5VUG0 894 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 CCDC43Q96MW1 224 aaKnown RBP13.08□□□□□ -0.32
AFF4-203ENST00000378595 NUP58Q9BVL2 599 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 THAP9Q9H5L6 903 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.32
AFF4-203ENST00000378595 THRAP3Q9Y2W1 955 aaKnown RBP13.08□□□□□ -0.32
AFF4-203ENST00000378595 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 SLC20A2Q08357 652 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 GRM4Q14833 912 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
AFF4-203ENST00000378595 SHROOM1Q2M3G4 852 aaPredicted RBP13.08□□□□□ -0.32
AFF4-203ENST00000378595 CT47A1Q5JQC4 288 aaPredicted RBP13.08□□□□□ -0.32
AFF4-203ENST00000378595 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 TRIM58Q8NG06 486 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 PIGOQ8TEQ8 1089 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
AFF4-203ENST00000378595 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■■■□□ 14.9
AFF4-203ENST00000378595 RASSF10A6NK89 507 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 PALMO75781 387 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 SRGNP10124 158 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 ZNF507Q8TCN5 953 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 IPO4Q8TEX9 1081 aaKnown RBP13.07□□□□□ -0.32
AFF4-203ENST00000378595 ARL8AQ96BM9 186 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 ARHGAP20Q9P2F6 1191 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 PDS5AQ29RF7 1337 aaKnown RBP13.07□□□□□ -0.32
AFF4-203ENST00000378595 GCNT3O95395 438 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 CFBP00751 764 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 HSPA1LP34931 641 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 SPATA4Q8NEY3 305 aa13.07□□□□□ -0.32
AFF4-203ENST00000378595 UBLCP1Q8WVY7 318 aaPredicted RBP13.07□□□□□ -0.32
AFF4-203ENST00000378595 EBAG9O00559 213 aa13.06□□□□□ -0.32
AFF4-203ENST00000378595 RHOBTB3O94955 611 aa13.06□□□□□ -0.32
AFF4-203ENST00000378595 HEXIM1O94992 359 aaKnown RBP13.06□□□□□ -0.32
AFF4-203ENST00000378595 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
AFF4-203ENST00000378595 TUBB4BP68371 445 aa13.06□□□□□ -0.32
AFF4-203ENST00000378595 PAPD7Q5XG87 772 aaKnown RBP13.06□□□□□ -0.32
AFF4-203ENST00000378595 FBXW10Q5XX13 1052 aa13.06□□□□□ -0.32
AFF4-203ENST00000378595 CCDC84Q86UT8 332 aaPredicted RBP13.06□□□□□ -0.32
AFF4-203ENST00000378595 DDX42Q86XP3 938 aaKnown RBP eCLIP13.06□□□□□ -0.32
AFF4-203ENST00000378595 TPH2Q8IWU9 490 aa13.06□□□□□ -0.32
AFF4-203ENST00000378595 GPATCH11Q8N954 259 aa13.06□□□□□ -0.32
AFF4-203ENST00000378595 CAPS2Q9BXY5 557 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms