RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 MTMR1Q13613 665 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 PWP2Q15269 919 aaKnown RBP17.84■□□□□ 0.45
CCDC107-204ENST00000378409 IL17AQ16552 155 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 ADALQ6DHV7 355 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 NLRX1Q86UT6 975 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 SLFN12Q8IYM2 578 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 SOCS4Q8WXH5 440 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 INPP4AQ96PE3 977 aaPredicted RBP17.84■□□□□ 0.45
CCDC107-204ENST00000378409 BEGAINQ9BUH8 593 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 KCNH7Q9NS40 1196 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 DIS3Q9Y2L1 958 aaKnown RBP17.84■□□□□ 0.45
CCDC107-204ENST00000378409 PCNTO95613 3336 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 WDR81Q562E7 1941 aa17.84■□□□□ 0.45
CCDC107-204ENST00000378409 GPR25O00155 361 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 EIF3JO75822 258 aaKnown RBP17.83■□□□□ 0.44
CCDC107-204ENST00000378409 RGS2P41220 211 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 GNPTABQ3T906 1256 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 EEPD1Q7L9B9 569 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 ZNF467Q7Z7K2 595 aaPredicted RBP17.83■□□□□ 0.44
CCDC107-204ENST00000378409 NPLOC4Q8TAT6 608 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 USP6NLQ92738 828 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 GPRASP2Q96D09 838 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 MAML3Q96JK9 1138 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 FAM20AQ96MK3 541 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 ZNF577Q9BSK1 485 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 CSRNP2Q9H175 543 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 PKD2L1Q9P0L9 805 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 GJD2Q9UKL4 321 aa17.83■□□□□ 0.44
CCDC107-204ENST00000378409 IPO5O00410 1097 aaKnown RBP17.82■□□□□ 0.44
CCDC107-204ENST00000378409 CYP2B6P20813 491 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 TECP42680 631 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 SPECC1Q5M775 1068 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 SEPT14Q6ZU15 432 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 ARMCX2Q7L311 632 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 FSIP1Q8NA03 581 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 CD99L2Q8TCZ2 262 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 MORC4Q8TE76 937 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 SLC5A5Q92911 643 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 TTC12Q9H892 705 aaPredicted RBP17.82■□□□□ 0.44
CCDC107-204ENST00000378409 AGO4Q9HCK5 861 aaKnown RBP17.82■□□□□ 0.44
CCDC107-204ENST00000378409 PCDHA12Q9UN75 941 aa17.82■□□□□ 0.44
CCDC107-204ENST00000378409 A0A1W2PQ27 194 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 A0A1W2PQ64 194 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 A0A1W2PQD8 194 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 RGS20O76081 388 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 HOXC6P09630 235 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 LONP1P36776 959 aaKnown RBP17.81■□□□□ 0.44
CCDC107-204ENST00000378409 FXR2P51116 673 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCDC107-204ENST00000378409 LRCH2Q5VUJ6 765 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 RESP18Q5W5W9 173 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 SHC4Q6S5L8 630 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 ZNF579Q8NAF0 562 aaKnown RBP17.81■□□□□ 0.44
CCDC107-204ENST00000378409 MRPS27Q92552 414 aaKnown RBP17.81■□□□□ 0.44
CCDC107-204ENST00000378409 CDHR1Q96JP9 859 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 APBA2Q99767 749 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 TSKSQ9UJT2 592 aa17.81■□□□□ 0.44
CCDC107-204ENST00000378409 MAFGO15525 162 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 GAS7O60861 476 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 FKTNO75072 461 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 CMA1P23946 247 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 SEMA3FQ13275 785 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 MAMDC4Q6UXC1 1216 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 FBXO16Q8IX29 292 aaPredicted RBP17.8■□□□□ 0.44
CCDC107-204ENST00000378409 TINF2Q9BSI4 451 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 RAB34Q9BZG1 259 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 GABRQQ9UN88 632 aa17.8■□□□□ 0.44
CCDC107-204ENST00000378409 SYNGAP1Q96PV0 1343 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 A0A1B0GVL5 298 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 POTEMA6NI47 508 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 SPATA31C2B4DYI2 1134 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 PSMD10O75832 226 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 MBD3O95983 291 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 CAP1Q01518 475 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
CCDC107-204ENST00000378409 CCDC73Q6ZRK6 1079 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 MSL3Q8N5Y2 521 aaKnown RBP17.79■□□□□ 0.44
CCDC107-204ENST00000378409 IGSF22Q8N9C0 903 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 GPT2Q8TD30 523 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 SYMPKQ92797 1274 aaKnown RBP17.79■□□□□ 0.44
CCDC107-204ENST00000378409 ERO1AQ96HE7 468 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 AK8Q96MA6 479 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 RIT2Q99578 217 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 TEKT3Q9BXF9 490 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 GOLPH3LQ9H4A5 285 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.79■□□□□ 0.44
CCDC107-204ENST00000378409 FAM13BQ9NYF5 915 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 LRWD1Q9UFC0 647 aa17.79■□□□□ 0.44
CCDC107-204ENST00000378409 MYH9P35579 1960 aaKnown RBP17.79■□□□□ 0.44
CCDC107-204ENST00000378409 PP2D1A8MPX8 630 aa17.78■□□□□ 0.44
CCDC107-204ENST00000378409 DDX39AO00148 427 aaKnown RBP17.78■□□□□ 0.44
CCDC107-204ENST00000378409 ATP9AO75110 1047 aa17.78■□□□□ 0.44
CCDC107-204ENST00000378409 SNAI1O95863 264 aaPredicted RBP17.78■□□□□ 0.44
CCDC107-204ENST00000378409 PFKFB1P16118 471 aa17.78■□□□□ 0.44
CCDC107-204ENST00000378409 ICAM3P32942 547 aa17.78■□□□□ 0.44
CCDC107-204ENST00000378409 FLT3LGP49771 235 aa17.78■□□□□ 0.44
CCDC107-204ENST00000378409 PRKCZQ05513 592 aa17.78■□□□□ 0.44
CCDC107-204ENST00000378409 PDIA5Q14554 519 aa17.78■□□□□ 0.44
CCDC107-204ENST00000378409 CCL14Q16627 93 aa17.78■□□□□ 0.44
CCDC107-204ENST00000378409 NCAPH2Q6IBW4 605 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms