RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ZKSCAN5Q9Y2L8 839 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 KRT1P04264 644 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 INPP5BP32019 993 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 BASP1P80723 227 aaKnown RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 PPP2R5EQ16537 467 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 LCA5Q86VQ0 697 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 FANCBQ8NB91 859 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 TRPC7Q9HCX4 862 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 BMP3P12645 472 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 SLC9A5Q14940 896 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 PPWD1Q96BP3 646 aaKnown RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 ACCSQ96QU6 501 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 CARD14Q9BXL6 1004 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 TRAPPC8Q9Y2L5 1435 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 MAP3K15Q6ZN16 1313 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 CIITAP33076 1130 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 IL13P35225 146 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 TRIP13Q15645 432 aaPredicted RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 TPCN1Q9ULQ1 816 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 MCF2LO15068 1137 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 UPP2O95045 317 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 STMN1P16949 149 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 CLNS1AP54105 237 aaKnown RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 CACNB2Q08289 660 aaPredicted RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 INTS4Q96HW7 963 aaKnown RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 WDR62O43379 1518 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 MED7O43513 233 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 EVI5O60447 810 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 RNF40O75150 1001 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 PSAPP07602 524 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 PTPN21Q16825 1174 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 TYW1Q9NV66 732 aaKnown RBP15.29■□□□□ 0.04
TRIM13-202ENST00000378182 BCAP29Q9UHQ4 241 aa15.29■□□□□ 0.04
TRIM13-202ENST00000378182 PPFIA2O75334 1257 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 ZNF75DP51815 510 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 EIF4A1P60842 406 aaKnown RBP15.28■□□□□ 0.04
TRIM13-202ENST00000378182 SLC27A3Q5K4L6 730 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 EFCAB13Q8IY85 973 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 TTLL6Q8N841 843 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 RASSF2P50749 326 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 GOLGA8FQ08AF8 430 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 GOLGA8DPQ0D2H9 430 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 MXD4Q14582 209 aaPredicted RBP15.28■□□□□ 0.04
TRIM13-202ENST00000378182 DYNLL2Q96FJ2 89 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 PUS3Q9BZE2 481 aaKnown RBP15.28■□□□□ 0.04
TRIM13-202ENST00000378182 BAIAP2L1Q9UHR4 511 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 HPCAL4Q9UM19 191 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 SFI1A8K8P3 1242 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 TOM1L1O75674 476 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 MYBP10242 640 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 HADHAP40939 763 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 STX1BP61266 288 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 CATSPER4Q7RTX7 472 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 PIM2Q9P1W9 311 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 PFKFB1P16118 471 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 ME3Q16798 604 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 SPOPLQ6IQ16 392 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 NOSTRINQ8IVI9 506 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 GPATCH8Q9UKJ3 1502 aaKnown RBP15.28■□□□□ 0.04
TRIM13-202ENST00000378182 WDR91A4D1P6 747 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 TUBB4AP04350 444 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
TRIM13-202ENST00000378182 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRIM13-202ENST00000378182 CFAP61Q8NHU2 1237 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 USP17L8P0C7I0 530 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 PPP2R5BQ15173 497 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 FAM117BQ6P1L5 589 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 IFT43Q96FT9 208 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
TRIM13-202ENST00000378182 A0A0D9SFI3 127 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 HOXD10P28358 340 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 SSTR3P32745 418 aaPredicted RBP15.27■□□□□ 0.04
TRIM13-202ENST00000378182 CC2D2BQ6DHV5 1058 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 DSCC1Q9BVC3 393 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 SAR1BQ9Y6B6 198 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 ZNF394Q53GI3 561 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 ANLNQ9NQW6 1124 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 TRIM67Q6ZTA4 783 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 LRRC8CQ8TDW0 803 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 PIGSQ96S52 555 aa15.27■□□□□ 0.04
TRIM13-202ENST00000378182 JPH2Q9BR39 696 aaPredicted RBP15.27■□□□□ 0.04
TRIM13-202ENST00000378182 MAP3K1Q13233 1512 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 MYO1FO00160 1098 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 PSMC2P35998 433 aaKnown RBP15.27■□□□□ 0.03
TRIM13-202ENST00000378182 BLVRAP53004 296 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 TBK1Q9UHD2 729 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 ZHX2Q9Y6X8 837 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 PRPSAP2O60256 369 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 IRX4P78413 519 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 CTTNQ14247 550 aaKnown RBP15.27■□□□□ 0.03
TRIM13-202ENST00000378182 MCTP2Q6DN12 878 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 SMYD4Q8IYR2 804 aaPredicted RBP15.27■□□□□ 0.03
TRIM13-202ENST00000378182 TMCO5AQ8N6Q1 288 aa15.27■□□□□ 0.03
TRIM13-202ENST00000378182 APOEP02649 317 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 FGAP02671 866 aa15.26■□□□□ 0.03
TRIM13-202ENST00000378182 ANKRD13CQ8N6S4 541 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms