RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 WDR11Q9BZH6 1224 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 ANKFY1Q9P2R3 1169 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 ADAMTS1Q9UHI8 967 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 NCOA3Q9Y6Q9 1424 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 PAK2Q13177 524 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 LONRF2Q1L5Z9 754 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 RC3H1Q5TC82 1133 aaKnown RBP14.47□□□□□ -0.09
NPHP4-203ENST00000378169 CIAPIN1Q6FI81 312 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 KCNB2Q92953 911 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 PCDHA6Q9UN73 950 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 TRPC6Q9Y210 931 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 PCDHA8Q9Y5H6 950 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 POLGP54098 1239 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-203ENST00000378169 DMP1Q13316 513 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-203ENST00000378169 LIN9Q5TKA1 542 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 SYCE1Q8N0S2 351 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 MB21D1Q8N884 522 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 MSANTD4Q8NCY6 345 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 FERMT1Q9BQL6 677 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 IQCGQ9H095 443 aaKnown RBP14.47□□□□□ -0.09
NPHP4-203ENST00000378169 ST7Q9NRC1 585 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 JCADQ9P266 1359 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 TSKSQ9UJT2 592 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 FLT1P17948 1338 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 ZBTB7AO95365 584 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 ARHGAP4P98171 946 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 BRD3Q15059 726 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 NACC1Q96RE7 527 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 RIMS1Q86UR5 1692 aaKnown RBP14.46□□□□□ -0.09
NPHP4-203ENST00000378169 KRIT1O00522 736 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 SP8Q8IXZ3 490 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 RETREG2Q8NC44 543 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 PPP1R14CQ8TAE6 165 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 TRIM6Q9C030 488 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-203ENST00000378169 THAP9Q9H5L6 903 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 NHEJ1Q9H9Q4 299 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-203ENST00000378169 ASNSP08243 561 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 GOLGA5Q8TBA6 731 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 RABGGTAQ92696 567 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 RPGRIP1Q96KN7 1286 aa14.46□□□□□ -0.09
NPHP4-203ENST00000378169 SEPT9Q9UHD8 586 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-203ENST00000378169 NDUFAB1O14561 156 aa14.46□□□□□ -0.1
NPHP4-203ENST00000378169 MRPS25P82663 173 aaKnown RBP14.46□□□□□ -0.1
NPHP4-203ENST00000378169 FMR1Q06787 632 aaKnown RBP eCLIP14.46□□□□□ -0.12e-17■■■■■ 60.8
NPHP4-203ENST00000378169 SLC27A3Q5K4L6 730 aa14.46□□□□□ -0.1
NPHP4-203ENST00000378169 CEP170P1Q96L14 293 aa14.46□□□□□ -0.1
NPHP4-203ENST00000378169 PHF20Q9BVI0 1012 aa14.46□□□□□ -0.1
NPHP4-203ENST00000378169 DPH5Q9H2P9 285 aa14.46□□□□□ -0.1
NPHP4-203ENST00000378169 PARVGQ9HBI0 331 aa14.46□□□□□ -0.1
NPHP4-203ENST00000378169 REREQ9P2R6 1566 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 POTEFA5A3E0 1075 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 FTCDO95954 541 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 AFPP02771 609 aaKnown RBP14.45□□□□□ -0.1
NPHP4-203ENST00000378169 POTEIP0CG38 1075 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 FCER1AP12319 257 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 STAT3P40763 770 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 TROAPQ12815 778 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 POTEGQ6S5H5 508 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 POTEEQ6S8J3 1075 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 ZNF354CQ86Y25 554 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 SCAF8Q9UPN6 1271 aaKnown RBP14.45□□□□□ -0.1
NPHP4-203ENST00000378169 HSPA1LP34931 641 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 IGBP1P78318 339 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 ST3GAL1Q11201 340 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 UNC13DQ70J99 1090 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 PANX2Q96RD6 677 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 OSBPL5Q9H0X9 879 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-203ENST00000378169 RICTORQ6R327 1708 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 HGSO14964 777 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-203ENST00000378169 GFPT2O94808 682 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 PSMC2P35998 433 aaKnown RBP14.45□□□□□ -0.1
NPHP4-203ENST00000378169 EN1Q05925 392 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-203ENST00000378169 SEPT14Q6ZU15 432 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 LRRC45Q96CN5 670 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 KCNF1Q9H3M0 494 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 MTMR4Q9NYA4 1195 aa14.45□□□□□ -0.1
NPHP4-203ENST00000378169 KIF20BQ96Q89 1820 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 RASA1P20936 1047 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 IRX5P78411 483 aaPredicted RBP14.44□□□□□ -0.1
NPHP4-203ENST00000378169 UAP1Q16222 522 aaPredicted RBP14.44□□□□□ -0.1
NPHP4-203ENST00000378169 C10orf67Q8IYJ2 551 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 C1orf112Q9NSG2 853 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 GCNT4Q9P109 453 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 MOCS3O95396 460 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 IFNB1P01574 187 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 MTF1Q14872 753 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 KRT71Q3SY84 523 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 BARGINQ6ZT62 677 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 C3orf67Q6ZVT6 689 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 RTKN2Q8IZC4 609 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 UHMK1Q8TAS1 419 aaKnown RBP14.44□□□□□ -0.1
NPHP4-203ENST00000378169 PLEKHG2Q9H7P9 1386 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 WTIPA6NIX2 430 aaPredicted RBP14.44□□□□□ -0.1
NPHP4-203ENST00000378169 NT5C2P49902 561 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 GUCY2DQ02846 1103 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 OTUD6BQ8N6M0 293 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 MAK16Q9BXY0 300 aaKnown RBP14.44□□□□□ -0.1
NPHP4-203ENST00000378169 PHLPP2Q6ZVD8 1323 aa14.44□□□□□ -0.1
NPHP4-203ENST00000378169 KIF11P52732 1056 aa14.43□□□□□ -0.1
NPHP4-203ENST00000378169 MYL7Q01449 175 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms