RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SAFBQ15424 915 aaKnown RBP eCLIP15.09■□□□□ 0.01
CKAP2-202ENST00000378034 LY6KQ17RY6 165 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 CEP55Q53EZ4 464 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 BRDTQ58F21 947 aaPredicted RBP15.09■□□□□ 0.01
CKAP2-202ENST00000378034 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
CKAP2-202ENST00000378034 GIMAP8Q8ND71 665 aaPredicted RBP15.09■□□□□ 0.01
CKAP2-202ENST00000378034 OR6J1Q8NGC5 347 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 SENP7Q9BQF6 1050 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 GJB4Q9NTQ9 266 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 SMC3Q9UQE7 1217 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 CCDC194A0A1B0GVG4 234 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 CTAGE5O15320 804 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 COL6A1P12109 1028 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 CIITAP33076 1130 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 ZNF76P36508 570 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 CPT1AP50416 773 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 MTMR1Q13613 665 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 LAMC2Q13753 1193 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 NEDD9Q14511 834 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 NONOQ15233 471 aaKnown RBP eCLIP15.09■□□□□ 0.01
CKAP2-202ENST00000378034 FSCN1Q16658 493 aaKnown RBP15.09■□□□□ 0.01
CKAP2-202ENST00000378034 GNASQ5JWF2 1037 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 TMEM63BQ5T3F8 832 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 CCSAPQ6IQ19 270 aaPredicted RBP15.09■□□□□ 0.01
CKAP2-202ENST00000378034 FBXO18Q8NFZ0 1043 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 C11orf49Q9H6J7 331 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 PHF24Q9UPV7 400 aa15.09■□□□□ 0.01
CKAP2-202ENST00000378034 MEIS1O00470 390 aa15.08■□□□□ 0
CKAP2-202ENST00000378034 HSCBQ8IWL3 235 aa15.08■□□□□ 0
CKAP2-202ENST00000378034 INTS4Q96HW7 963 aaKnown RBP15.08■□□□□ 0
CKAP2-202ENST00000378034 PAWRQ96IZ0 340 aaKnown RBP15.08■□□□□ 0
CKAP2-202ENST00000378034 ZFP91Q96JP5 570 aaPredicted RBP15.08■□□□□ 0
CKAP2-202ENST00000378034 A6NJR5 290 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 KPNA6O60684 536 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
CKAP2-202ENST00000378034 UBA1P22314 1058 aaKnown RBP15.07■□□□□ 0
CKAP2-202ENST00000378034 GJB2P29033 226 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 ARHGAP1Q07960 439 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 SEMA3FQ13275 785 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 KCNA10Q16322 511 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 CELF3Q5SZQ8 465 aaKnown RBP15.07■□□□□ 0
CKAP2-202ENST00000378034 DHX37Q8IY37 1157 aaKnown RBP15.07■□□□□ 0
CKAP2-202ENST00000378034 DIS3L2Q8IYB7 885 aaKnown RBP15.07■□□□□ 0
CKAP2-202ENST00000378034 TBCKQ8TEA7 893 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 COPS5Q92905 334 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 MYADML2A6NDP7 307 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 CABYRO75952 493 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 ACLYP53396 1101 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
CKAP2-202ENST00000378034 SP2Q02086 613 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 MYSM1Q5VVJ2 828 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 MOXD1Q6UVY6 613 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 OXER1Q8TDS5 423 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 DIS3LQ8TF46 1054 aaKnown RBP15.07■□□□□ 0
CKAP2-202ENST00000378034 TNFRSF25Q93038 417 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 NAP1L4Q99733 375 aaKnown RBP15.07■□□□□ 0
CKAP2-202ENST00000378034 POLR3EQ9NVU0 708 aa15.07■□□□□ 0
CKAP2-202ENST00000378034 GGPS1O95749 300 aa15.06■□□□□ 0
CKAP2-202ENST00000378034 PPTC7Q8NI37 304 aa15.06■□□□□ 0
CKAP2-202ENST00000378034 FOXP1Q9H334 677 aaPredicted RBP15.06■□□□□ 0
CKAP2-202ENST00000378034 MLXIPQ9HAP2 919 aa15.06■□□□□ 0
CKAP2-202ENST00000378034 KCNH7Q9NS40 1196 aa15.06■□□□□ 0
CKAP2-202ENST00000378034 IGLV3-22A0A075B6J6 115 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 CYP3A7-CYP3A51PA0A087WV96 503 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 BTBD18B2RXH4 712 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 FAM86B1E9PN63 330 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 ASGR1P07306 291 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 FAM86B2P0C5J1 330 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 KCNA2P16389 499 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 CYP3A7P24462 503 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 FOSBP53539 338 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 BEX3Q00994 111 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 METTL7BQ6UX53 244 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 PLA2G4DQ86XP0 818 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 CYP2W1Q8TAV3 490 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 HTATIP2Q9BUP3 242 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 NFASCO94856 1347 aa15.05■□□□□ 0
CKAP2-202ENST00000378034 PTGS1P23219 599 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 NR5A1Q13285 461 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 INF2Q27J81 1249 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 PIK3AP1Q6ZUJ8 805 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 NEK8Q86SG6 692 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 GLT1D1Q96MS3 346 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 SEZ6LQ9BYH1 1024 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 SENP6Q9GZR1 1112 aaPredicted RBP15.05■□□□□ -0
CKAP2-202ENST00000378034 AGO4Q9HCK5 861 aaKnown RBP15.05■□□□□ -0
CKAP2-202ENST00000378034 BRCA2P51587 3418 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 ELP1O95163 1332 aa15.05■□□□□ -0
CKAP2-202ENST00000378034 A0A1W2PQ45 241 aaPredicted RBP15.04■□□□□ -0
CKAP2-202ENST00000378034 A0A1W2PQY0 241 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 EDIL3O43854 480 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 GCFC2P16383 781 aaKnown RBP15.04■□□□□ -0
CKAP2-202ENST00000378034 GUCY1B3Q02153 619 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 Q4G0T1 1027 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 AFG1LQ8WV93 481 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 SPATA33Q96N06 139 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 MBOAT7Q96N66 472 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 ATP9AO75110 1047 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 PPFIA4O75335 1185 aa15.04■□□□□ -0
CKAP2-202ENST00000378034 MMP3P08254 477 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms