RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CSF2RAP15509 400 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 ADCY7P51828 1080 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 RCAN1P53805 252 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 CCL23P55773 120 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 CCT2P78371 535 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 MRPS9P82933 396 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 SP4Q02446 784 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 PPIGQ13427 754 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 CELF3Q5SZQ8 465 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 NLRX1Q86UT6 975 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 ALG1Q9BT22 464 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 PCDHA6Q9UN73 950 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 PCDHA8Q9Y5H6 950 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 FRMPD4Q14CM0 1322 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 SZT2Q5T011 3432 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 SMCO2A6NFE2 343 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 STXBP3O00186 592 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 FIBPO43427 364 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 ACRP10323 421 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 TGFB3P10600 412 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 EPHB4P54760 987 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 SP2Q02086 613 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 FUT2Q10981 343 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 PCNX4Q63HM2 1172 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 PPP1R18Q6NYC8 613 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 NFRKBQ6P4R8 1299 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 PHKBQ93100 1093 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 EMID1Q96A84 441 aaPredicted RBP13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 PGBD1Q96JS3 809 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 KATNAL1Q9BW62 490 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 PKD2L1Q9P0L9 805 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 UMODL1Q5DID0 1318 aa13.27□□□□□ -0.29
SMARCE1-203ENST00000377808 hCG_1984214I3L0E3 225 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 PSEN2P49810 448 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 STK3Q13188 491 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 NEDD9Q14511 834 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 MFSD10Q14728 455 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 HSDL1Q3SXM5 330 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 TYW1BQ6NUM6 668 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 XRRA1Q6P2D8 792 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 CYFIP1Q7L576 1253 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 ZNF713Q8N859 430 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 C7orf31Q8N865 590 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 INPP4AQ96PE3 977 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 NOC4LQ9BVI4 516 aaKnown RBP13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 NCOA5Q9HCD5 579 aaKnown RBP13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 PDRG1Q9NUG6 133 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 BARHL2Q9NY43 387 aa13.26□□□□□ -0.29
SMARCE1-203ENST00000377808 MYH7BA7E2Y1 1941 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 SPATA31C2B4DYI2 1134 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 SCG2P13521 617 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 ICAM3P32942 547 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 PTPN11Q06124 597 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 SEMA3FQ13275 785 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 PTGISQ16647 500 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 KIAA0753Q2KHM9 967 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 Q7L0L9 218 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 KAT2BQ92831 832 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 SCLYQ96I15 445 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■■■□□ 15.4
SMARCE1-203ENST00000377808 BCAS3Q9H6U6 928 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 TMEM260Q9NX78 707 aa13.25□□□□□ -0.29
SMARCE1-203ENST00000377808 SCN10AQ9Y5Y9 1956 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 NID2Q14112 1375 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 CPLX1O14810 134 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 PDIA3P30101 505 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 MTMR1Q13613 665 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 UTP14CQ5TAP6 766 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 GDF6Q6KF10 455 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 PSRC1Q6PGN9 363 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 METTL7BQ6UX53 244 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 FBXL16Q8N461 479 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 DEFB123Q8N688 67 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 CDHR1Q96JP9 859 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 ANO3Q9BYT9 981 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 AGXT2Q9BYV1 514 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 TM6SF1Q9BZW5 370 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 GLT8D2Q9H1C3 349 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 WNT8AQ9H1J5 351 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 IL23AQ9NPF7 189 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
SMARCE1-203ENST00000377808 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 PPFIA4O75335 1185 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 F2P00734 622 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 FOSP01100 380 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 LGALS2P05162 132 aa13.23□□□□□ -0.29
SMARCE1-203ENST00000377808 ITGB5P18084 799 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms