RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 IDEP14735 1019 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 CREG2Q8IUH2 290 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 ZC3H3Q8IXZ2 948 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 CRYGNQ8WXF5 182 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 SYN2Q92777 582 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 CEP63Q96MT8 703 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 MRIQ9BWK5 157 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 IFIH1Q9BYX4 1025 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 ZC3H12CQ9C0D7 883 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 MMRN2Q9H8L6 949 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 SNX12Q9UMY4 172 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 MACROD2A1Z1Q3 448 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 ERICH4A6NGS2 130 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 UBAP1LF5GYI3 381 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 F8W031 263 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 HLA-DOAP06340 250 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 EIF4A3P38919 411 aaKnown RBP13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 LRRC41Q15345 812 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 HGSNATQ68CP4 663 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 PDXDC1Q6P996 788 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 NUCKS1Q9H1E3 243 aaKnown RBP13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 PANK4Q9NVE7 773 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 COL4A3BPQ9Y5P4 624 aa13.02□□□□□ -0.32
TNFRSF9-201ENST00000377507 FRMD3A2A2Y4 597 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 LRRIQ3A6PVS8 624 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 TACC1O75410 805 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 GNA14O95837 355 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 SLC16A2P36021 539 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 AARSP49588 968 aaKnown RBP eCLIP13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 KCTD1Q719H9 257 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 RRAGAQ7L523 313 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 MMGT1Q8N4V1 131 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 FAM71BQ8TC56 605 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 TEKT1Q969V4 418 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 DNAJC18Q9H819 358 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 MED4Q9NPJ6 270 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 CAPN6Q9Y6Q1 641 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 ZNF185O15231 689 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 NOL4O94818 638 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 MAP9Q49MG5 647 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 IQCEQ6IPM2 695 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 DCAF4Q8WV16 495 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 RUBCNQ92622 972 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 CAPZA3Q96KX2 299 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 ZDHHC15Q96MV8 337 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 MXD3Q9BW11 206 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 KCTD10Q9H3F6 313 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 CEP72Q9P209 647 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 MYH7BA7E2Y1 1941 aa13.01□□□□□ -0.33
TNFRSF9-201ENST00000377507 ANKRD31Q8N7Z5 1873 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 PITPNM2Q9BZ72 1349 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 ZC3H4Q9UPT8 1303 aaKnown RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 AKR1B10O60218 316 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 N4BP1O75113 896 aaKnown RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 PLA2G4BP0C869 781 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 NPR1P16066 1061 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 HNRNPH2P55795 449 aaKnown RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 NFIAQ12857 509 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 QRICH1Q2TAL8 776 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 MUM1L1Q5H9M0 696 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 CCNI2Q6ZMN8 369 aaPredicted RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 CCDC65Q8IXS2 484 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 GJA10Q969M2 543 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 DHX36Q9H2U1 1008 aaKnown RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 ACBD3Q9H3P7 528 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 JADE2Q9NQC1 790 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 KIAA1024Q9UPX6 916 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 E9PMD0 336 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 TRAF5O00463 557 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 TCP1P17987 556 aaKnown RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 CYP11B2P19099 503 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 MAGEA1P43355 309 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 SCNN1DP51172 638 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 GYS2P54840 703 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 SLC12A3P55017 1021 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 SPIRE1Q08AE8 756 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 AP3B2Q13367 1082 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 MCTP2Q6DN12 878 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 ZFPM1Q8IX07 1006 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 SLFN12Q8IYM2 578 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 SMCR8Q8TEV9 937 aaPredicted RBP13□□□□□ -0.33
TNFRSF9-201ENST00000377507 SCFD1Q8WVM8 642 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 FGFBP2Q9BYJ0 223 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 KANSL2Q9H9L4 492 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 MLXIPQ9HAP2 919 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 PCDHA1Q9Y5I3 950 aa13□□□□□ -0.33
TNFRSF9-201ENST00000377507 ARFGEF1Q9Y6D6 1849 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
TNFRSF9-201ENST00000377507 MYH4Q9Y623 1939 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms