RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 RTN1Q16799 776 aa20.53■□□□□ 0.88
IRF3-202ENST00000377135 XRRA1Q6P2D8 792 aa20.53■□□□□ 0.88
IRF3-202ENST00000377135 OTOP2Q7RTS6 562 aa20.53■□□□□ 0.88
IRF3-202ENST00000377135 HEATR3Q7Z4Q2 680 aa20.53■□□□□ 0.88
IRF3-202ENST00000377135 ALG1Q9BT22 464 aa20.53■□□□□ 0.88
IRF3-202ENST00000377135 NAP1L2Q9ULW6 460 aaPredicted RBP20.53■□□□□ 0.88
IRF3-202ENST00000377135 V9GY48 417 aaPredicted RBP20.53■□□□□ 0.88
IRF3-202ENST00000377135 SCN10AQ9Y5Y9 1956 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 KLF18A0A0U1RQI7 1052 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 REC8O95072 547 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 UBA1P22314 1058 aaKnown RBP20.52■□□□□ 0.87
IRF3-202ENST00000377135 ICAM3P32942 547 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 HSPA4P34932 840 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 PCNX4Q63HM2 1172 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 GDF6Q6KF10 455 aaPredicted RBP20.52■□□□□ 0.87
IRF3-202ENST00000377135 SESTD1Q86VW0 696 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 GUCD1Q96NT3 240 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 INPP4AQ96PE3 977 aaPredicted RBP20.52■□□□□ 0.87
IRF3-202ENST00000377135 KATNAL1Q9BW62 490 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 MTIF3Q9H2K0 278 aaKnown RBP20.52■□□□□ 0.87
IRF3-202ENST00000377135 BCAS3Q9H6U6 928 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 HDAC6Q9UBN7 1215 aa20.52■□□□□ 0.87
IRF3-202ENST00000377135 FRMPD4Q14CM0 1322 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 GRXCR1A8MXD5 290 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 ZNF286BP0CG31 522 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 CPA1P15085 419 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 BFSP2Q13515 415 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 NEDD9Q14511 834 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 MFSD10Q14728 455 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 KIAA0753Q2KHM9 967 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 DEFB128Q7Z7B8 93 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 JAKMIP1Q96N16 626 aaKnown RBP20.51■□□□□ 0.87
IRF3-202ENST00000377135 CDX2Q99626 313 aaPredicted RBP20.51■□□□□ 0.87
IRF3-202ENST00000377135 TTYH1Q9H313 450 aaPredicted RBP20.51■□□□□ 0.87
IRF3-202ENST00000377135 CXXC1Q9P0U4 656 aaPredicted RBP20.51■□□□□ 0.87
IRF3-202ENST00000377135 SNX14Q9Y5W7 946 aa20.51■□□□□ 0.87
IRF3-202ENST00000377135 MYH7BA7E2Y1 1941 aa20.5■□□□□ 0.87
IRF3-202ENST00000377135 PITPNM1O00562 1244 aa20.5■□□□□ 0.87
IRF3-202ENST00000377135 FIBPO43427 364 aa20.5■□□□□ 0.87
IRF3-202ENST00000377135 IQCF3P0C7M6 154 aa20.5■□□□□ 0.87
IRF3-202ENST00000377135 HOXD8P13378 290 aaPredicted RBP20.5■□□□□ 0.87
IRF3-202ENST00000377135 NLRX1Q86UT6 975 aa20.5■□□□□ 0.87
IRF3-202ENST00000377135 SLC17A8Q8NDX2 589 aa20.5■□□□□ 0.87
IRF3-202ENST00000377135 SPDYE3A6NKU9 549 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 GOLGA8AA7E2F4 631 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 GOLGA8BA8MQT2 603 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 HAS3O00219 553 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 F2P00734 622 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 DNAJB2P25686 324 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 FUT2Q10981 343 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 UBE2SQ16763 222 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 BLOC1S2Q6QNY1 142 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 Q6ZUG5 572 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 CYFIP1Q7L576 1253 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 VWCEQ96DN2 955 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 GTF2IRD1Q9UHL9 959 aa20.49■□□□□ 0.87
IRF3-202ENST00000377135 NOP56O00567 594 aaKnown RBP20.48■□□□□ 0.87
IRF3-202ENST00000377135 PFKMP08237 780 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 RFC2P35250 354 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 CCDC155Q8N6L0 562 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 TIFAQ96CG3 184 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 C16orf70Q9BSU1 422 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 FTOQ9C0B1 505 aaKnown RBP eCLIP20.48■□□□□ 0.87
IRF3-202ENST00000377135 FAM217BQ9NTX9 383 aaPredicted RBP20.48■□□□□ 0.87
IRF3-202ENST00000377135 PCDHA6Q9UN73 950 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 PCDHA8Q9Y5H6 950 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 SLC4A7Q9Y6M7 1214 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 COL6A3P12111 3177 aa20.48■□□□□ 0.87
IRF3-202ENST00000377135 TMEM265A0A087WTH1 108 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 CCDC196A0A1B0GTZ2 297 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 PSMA5P28066 241 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 CDC27P30260 824 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 ADD1P35611 737 aaKnown RBP20.47■□□□□ 0.87
IRF3-202ENST00000377135 PBX2P40425 430 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 NAPAP54920 295 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 APOBRQ0VD83 1088 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 SEMA3FQ13275 785 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 WWC2Q6AWC2 1192 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 METTL7BQ6UX53 244 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 CAGE1Q8TC20 777 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 CTAGE1Q96RT6 745 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 SENP7Q9BQF6 1050 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 USP26Q9BXU7 913 aa20.47■□□□□ 0.87
IRF3-202ENST00000377135 ZBBXA8MT70 800 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 H3BRB1 525 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 RCAN1P53805 252 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 GIMAP8Q8ND71 665 aaPredicted RBP20.46■□□□□ 0.87
IRF3-202ENST00000377135 BRF1Q92994 677 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 PBX4Q9BYU1 374 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 ZNF576Q9H609 170 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 TUT1Q9H6E5 874 aaKnown RBP20.46■□□□□ 0.87
IRF3-202ENST00000377135 PPP4R2Q9NY27 417 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 MSRAQ9UJ68 235 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 CNTNAP5Q8WYK1 1306 aa20.46■□□□□ 0.87
IRF3-202ENST00000377135 ACTN1P12814 892 aa20.45■□□□□ 0.86
IRF3-202ENST00000377135 RPS6KB1P23443 525 aa20.45■□□□□ 0.86
IRF3-202ENST00000377135 METAP2P50579 478 aaKnown RBP eCLIP20.45■□□□□ 0.86
IRF3-202ENST00000377135 ZNF200P98182 395 aaPredicted RBP20.45■□□□□ 0.86
IRF3-202ENST00000377135 AFAP1L1Q8TED9 768 aa20.45■□□□□ 0.86
IRF3-202ENST00000377135 GPRASP2Q96D09 838 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms