RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 CACNA2D3Q8IZS8 1091 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 RSAD2Q8WXG1 361 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 CLRN2A0PK11 232 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 STAM2O75886 525 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 RASA3Q14644 834 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 ARHGAP24Q8N264 748 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 MCAMP43121 646 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 GNGT1P63211 74 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 AFPP02771 609 aaKnown RBP11.97□□□□□ -0.49
MDC1-201ENST00000376406 KRT15P19012 456 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 VPS52Q8N1B4 723 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 FEM1BQ9UK73 627 aa11.97□□□□□ -0.49
MDC1-201ENST00000376406 PSMC2P35998 433 aaKnown RBP11.96□□□□□ -0.49
MDC1-201ENST00000376406 SARNPP82979 210 aaKnown RBP11.96□□□□□ -0.49
MDC1-201ENST00000376406 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.49
MDC1-201ENST00000376406 SMYD4Q8IYR2 804 aaPredicted RBP11.96□□□□□ -0.49
MDC1-201ENST00000376406 GCNAQ96QF7 691 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 NR5A1Q13285 461 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 SYNE4Q8N205 404 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 FAM167AQ96KS9 214 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 GDAP1L1Q96MZ0 367 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 CRAMP1Q96RY5 1269 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 ZNF577Q9BSK1 485 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 MECOMQ03112 1051 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
MDC1-201ENST00000376406 BBOF1Q8ND07 529 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 ANKRD36BP1Q96IX9 119 aa11.96□□□□□ -0.49
MDC1-201ENST00000376406 INO80BQ9C086 356 aaPredicted RBP11.96□□□□□ -0.49
MDC1-201ENST00000376406 MUM1L1Q5H9M0 696 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 ARMCX5Q6P1M9 558 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 MED10Q9BTT4 135 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 PCDHB6Q9Y5E3 794 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 RASGRF1Q13972 1273 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 TCP11X2Q5H9J9 407 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 KCNV1Q6PIU1 500 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 GRAMD1CQ8IYS0 662 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 C21orf2O43822 256 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 H2AFZP0C0S5 128 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 ZNF131P52739 623 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 NEDD9Q14511 834 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 H2AFVQ71UI9 128 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 TCP11Q8WWU5 503 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 CCT6BQ92526 530 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 VPS37BQ9H9H4 285 aa11.96□□□□□ -0.5
MDC1-201ENST00000376406 TMEM191BP0C7N4 346 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 NFKBIAP25963 317 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 RASSF2P50749 326 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 PI16Q6UXB8 463 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 RAB3IPQ96QF0 476 aaPredicted RBP11.95□□□□□ -0.5
MDC1-201ENST00000376406 AKT3Q9Y243 479 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 SOWAHDA6NJG2 315 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 MAN1A1P33908 653 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 MFAP3P55082 362 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 MFSD14CQ5VZR4 134 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 RCSD1Q6JBY9 416 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 CCDC160A6NGH7 325 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 COBLO75128 1261 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 CD19P15391 556 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 NR2F2P24468 414 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 RCAN1P53805 252 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 GOLGA8FQ08AF8 430 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 GOLGA8DPQ0D2H9 430 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 ORC2Q13416 577 aaPredicted RBP11.95□□□□□ -0.5
MDC1-201ENST00000376406 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
MDC1-201ENST00000376406 TXNRD1Q16881 649 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 KRT12Q99456 494 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 TMEM206Q9H813 350 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 PDE11AQ9HCR9 933 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 F8W8V4 182 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 CAPN9O14815 690 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 IGKV5-2P06315 115 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 PSAPP07602 524 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 ADCY8P40145 1251 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 NHEJ1Q9H9Q4 299 aaPredicted RBP11.95□□□□□ -0.5
MDC1-201ENST00000376406 TRIM28Q13263 835 aaKnown RBP11.95□□□□□ -0.5
MDC1-201ENST00000376406 LMNTD2Q8IXW0 634 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 MCUR1Q96AQ8 359 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 HOMER3Q9NSC5 361 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 SPTLC3Q9NUV7 552 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 RNF40O75150 1001 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 CRCPO75575 148 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 PIK3CAP42336 1068 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
MDC1-201ENST00000376406 PLEKHA4Q9H4M7 779 aa11.95□□□□□ -0.5
MDC1-201ENST00000376406 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
MDC1-201ENST00000376406 PASKQ96RG2 1323 aa11.94□□□□□ -0.5
MDC1-201ENST00000376406 USP17L5A8MUK1 530 aa11.94□□□□□ -0.5
MDC1-201ENST00000376406 VSIG1Q86XK7 387 aa11.94□□□□□ -0.5
MDC1-201ENST00000376406 STRBPQ96SI9 672 aaKnown RBP11.94□□□□□ -0.5
MDC1-201ENST00000376406 RABEP2Q9H5N1 569 aa11.94□□□□□ -0.5
MDC1-201ENST00000376406 SAMSN1Q9NSI8 373 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms