RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PASKQ96RG2 1323 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 TMEM232C9JQI7 657 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 IFT88Q13099 833 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 TMCO4Q5TGY1 634 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 ATF2P15336 505 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 TNNI1P19237 187 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 VPS41P49754 854 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 EPHB4P54760 987 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 HSP90AA5PQ58FG0 334 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 BSPRYQ5W0U4 402 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 CD209Q9NNX6 404 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 CAMTA2O94983 1202 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 TTC19Q6DKK2 380 aaPredicted RBP13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 SULF1Q8IWU6 871 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 SLC35F6Q8N357 371 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 RDH13Q8NBN7 331 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 AMNQ9BXJ7 453 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 HAUS2Q9NVX0 235 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 CLRN2A0PK11 232 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 KRT19P08727 400 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 COPB1P53618 953 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 DCPSQ96C86 337 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 RPN1P04843 607 aaKnown RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 GABPAQ06546 454 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 SLC39A14Q15043 492 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 RBBP5Q15291 538 aaKnown RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 GPR162Q16538 588 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 PODNQ7Z5L7 613 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 UHMK1Q8TAS1 419 aaKnown RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 PCDHA1Q9Y5I3 950 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 A0A087WUV0 522 aaPredicted RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 GAS7O60861 476 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 CYP2J2P51589 502 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 PDIA6Q15084 440 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 POLR3EQ9NVU0 708 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 CSF1RP07333 972 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 LONP1P36776 959 aaKnown RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 IL9RQ01113 521 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 ALX1Q15699 326 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 HADHQ16836 314 aaKnown RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 PRR16Q569H4 304 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 NXNQ6DKJ4 435 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 FOXP4Q8IVH2 680 aaPredicted RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 PCDHA4Q9UN74 947 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 SNAP23O00161 211 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 LAD1O00515 517 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 PPP6R2O75170 966 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 CASP14P31944 242 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 MTA3Q9BTC8 594 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 METTL14Q9HCE5 456 aaKnown RBP13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 NRBP1Q9UHY1 535 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 PCDHA12Q9UN75 941 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 UTYO14607 1347 aa13.37□□□□□ -0.27
NPLOC4-202ENST00000374747 NOP56O00567 594 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 PRPF3O43395 683 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 SMIM24O75264 130 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 PTPROQ16827 1216 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 KAZALD1Q96I82 304 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 THEGQ9P2T0 379 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 RAD17O75943 681 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 PRPF6O94906 941 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 P4HA1P13674 534 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 TPH2Q8IWU9 490 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 HAUS1Q96CS2 278 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 ALAS1P13196 640 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 SERPINB6P35237 376 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 EHHADHQ08426 723 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 PABPC4Q13310 644 aaKnown RBP eCLIP13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 CUL4BQ13620 913 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 ADAT2Q7Z6V5 191 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 UIMC1Q96RL1 719 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 TTLL3Q9Y4R7 772 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 CLIC4Q9Y696 253 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 CYP2D7A0A087X1C5 515 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 FRMD3A2A2Y4 597 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 PRDX5P30044 214 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 PDE6CP51160 858 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 RNASELQ05823 741 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 GNPTABQ3T906 1256 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 CIAPIN1Q6FI81 312 aa13.36□□□□□ -0.27
NPLOC4-202ENST00000374747 MYO3BQ8WXR4 1341 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 IKBKBO14920 756 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 PPFIA2O75334 1257 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 CDK8P49336 464 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 PTGDRQ13258 359 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 CAPN12Q6ZSI9 719 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 ARMC9Q7Z3E5 817 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms