RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 FAM86B1E9PN63 330 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 FAM86B2P0C5J1 330 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 SYT1P21579 422 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 CYP3A7P24462 503 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 NKX3-2P78367 333 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 SETQ01105 290 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-201ENST00000374673 MTMR1Q13613 665 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 GNL2Q13823 731 aaKnown RBP17.08■□□□□ 0.32
HSPG2-201ENST00000374673 TMEM63BQ5T3F8 832 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 TLK2Q86UE8 772 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 NOSTRINQ8IVI9 506 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 CYP2W1Q8TAV3 490 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 LENG1Q96BZ8 264 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-201ENST00000374673 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 NAP1L4Q99733 375 aaKnown RBP17.08■□□□□ 0.32
HSPG2-201ENST00000374673 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.32
HSPG2-201ENST00000374673 OGDHLQ9ULD0 1010 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 SYNRGQ9UMZ2 1314 aa17.07■□□□□ 0.32
HSPG2-201ENST00000374673 ADAMTS4O75173 837 aa17.07■□□□□ 0.32
HSPG2-201ENST00000374673 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
HSPG2-201ENST00000374673 UBA1P22314 1058 aaKnown RBP17.07■□□□□ 0.32
HSPG2-201ENST00000374673 GJA9P57773 515 aa17.07■□□□□ 0.32
HSPG2-201ENST00000374673 LY6KQ17RY6 165 aa17.07■□□□□ 0.32
HSPG2-201ENST00000374673 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
HSPG2-201ENST00000374673 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
HSPG2-201ENST00000374673 XPNPEP3Q9NQH7 507 aa17.07■□□□□ 0.32
HSPG2-201ENST00000374673 KCNH7Q9NS40 1196 aa17.07■□□□□ 0.32
HSPG2-201ENST00000374673 CENPFP49454 3210 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 VPS37CA5D8V6 355 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-201ENST00000374673 STX6O43752 255 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 TDP2O95551 362 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 GH1P01241 217 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 ARP10275 920 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 GCFC2P16383 781 aaKnown RBP17.06■□□□□ 0.32
HSPG2-201ENST00000374673 SP2Q02086 613 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 NEDD9Q14511 834 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 Q4G0T1 1027 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 GJC2Q5T442 439 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-201ENST00000374673 MCTP1Q6DN14 999 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 PPP4R3AQ6IN85 833 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 SPRYD3Q8NCJ5 442 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 COPS5Q92905 334 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 EMID1Q96A84 441 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-201ENST00000374673 LENG9Q96B70 501 aa17.06■□□□□ 0.32
HSPG2-201ENST00000374673 ATP9AO75110 1047 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 PGK1P00558 417 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 KCNA2P16389 499 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 PTGS1P23219 599 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 CST5P28325 142 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-201ENST00000374673 ANP32AP39687 249 aaKnown RBP17.05■□□□□ 0.32
HSPG2-201ENST00000374673 TRAPPC10P48553 1259 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 ARHGAP1Q07960 439 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 PRR16Q569H4 304 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 ANKLE1Q8NAG6 615 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 ARRDC4Q8NCT1 418 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 GIMAP8Q8ND71 665 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-201ENST00000374673 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 AP5M1Q9H0R1 490 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 AGO4Q9HCK5 861 aaKnown RBP17.05■□□□□ 0.32
HSPG2-201ENST00000374673 MTMR6Q9Y217 621 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 MYH15Q9Y2K3 1946 aa17.05■□□□□ 0.32
HSPG2-201ENST00000374673 NFASCO94856 1347 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 CCDC85CA6NKD9 419 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 CTAGE5O15320 804 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 DYNC1LI2O43237 492 aaPredicted RBP17.04■□□□□ 0.32
HSPG2-201ENST00000374673 CCNT1O60563 726 aaKnown RBP17.04■□□□□ 0.32
HSPG2-201ENST00000374673 GGPS1O95749 300 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 TFRCP02786 760 aaKnown RBP17.04■□□□□ 0.32
HSPG2-201ENST00000374673 LAMC2Q13753 1193 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 LRRC41Q15345 812 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 CELF3Q5SZQ8 465 aaKnown RBP17.04■□□□□ 0.32
HSPG2-201ENST00000374673 MYSM1Q5VVJ2 828 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 RNF180Q86T96 592 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 DHX37Q8IY37 1157 aaKnown RBP17.04■□□□□ 0.32
HSPG2-201ENST00000374673 KLHDC9Q8NEP7 349 aa17.04■□□□□ 0.32
HSPG2-201ENST00000374673 DDX25Q9UHL0 483 aaKnown RBP17.04■□□□□ 0.32
HSPG2-201ENST00000374673 NOL7Q9UMY1 257 aaKnown RBP17.04■□□□□ 0.32
HSPG2-201ENST00000374673 KIAA0100Q14667 2235 aaKnown RBP17.04■□□□□ 0.32
HSPG2-201ENST00000374673 MYADML2A6NDP7 307 aa17.03■□□□□ 0.32
HSPG2-201ENST00000374673 SLC37A4O43826 429 aa17.03■□□□□ 0.32
HSPG2-201ENST00000374673 FARP2O94887 1054 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-201ENST00000374673 C6orf222P0C671 652 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-201ENST00000374673 ORC2Q13416 577 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-201ENST00000374673 CCSAPQ6IQ19 270 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-201ENST00000374673 METTL7BQ6UX53 244 aa17.03■□□□□ 0.32
HSPG2-201ENST00000374673 BRAPQ7Z569 592 aa17.03■□□□□ 0.32
HSPG2-201ENST00000374673 MLXIPQ9HAP2 919 aa17.03■□□□□ 0.32
HSPG2-201ENST00000374673 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
HSPG2-201ENST00000374673 A6NJR5 290 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 IPO5O00410 1097 aaKnown RBP17.02■□□□□ 0.32
HSPG2-201ENST00000374673 DNM1LO00429 736 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 WNT7AO00755 349 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 MSH4O15457 936 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 MNX1P50219 401 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-201ENST00000374673 CPT1AP50416 773 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 IRX5P78411 483 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-201ENST00000374673 ITGB3BPQ13352 177 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms