RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 TTLL4Q14679 1199 aa21.1■□□□□ 0.97
CDX4-201ENST00000373514 MCTP2Q6DN12 878 aa21.1■□□□□ 0.97
CDX4-201ENST00000373514 IQSEC1Q6DN90 963 aa21.1■□□□□ 0.97
CDX4-201ENST00000373514 XRRA1Q6P2D8 792 aa21.1■□□□□ 0.97
CDX4-201ENST00000373514 DIS3LQ8TF46 1054 aaKnown RBP21.1■□□□□ 0.97
CDX4-201ENST00000373514 UIMC1Q96RL1 719 aa21.1■□□□□ 0.97
CDX4-201ENST00000373514 BCAS3Q9H6U6 928 aa21.1■□□□□ 0.97
CDX4-201ENST00000373514 KIF3AQ9Y496 699 aa21.1■□□□□ 0.97
CDX4-201ENST00000373514 DUSP11O75319 330 aaKnown RBP21.09■□□□□ 0.97
CDX4-201ENST00000373514 STAM2O75886 525 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 TFRCP02786 760 aaKnown RBP21.09■□□□□ 0.97
CDX4-201ENST00000373514 CYP3A4P08684 503 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 SP2Q02086 613 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 GNPTABQ3T906 1256 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 MXRA8Q9BRK3 442 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 DDX41Q9UJV9 622 aaKnown RBP21.09■□□□□ 0.97
CDX4-201ENST00000373514 IGLV3-22A0A075B6J6 115 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 CTAGE5O15320 804 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 TDP2O95551 362 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 MNX1P50219 401 aaPredicted RBP21.09■□□□□ 0.97
CDX4-201ENST00000373514 BEX3Q00994 111 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 MTMR1Q13613 665 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 GPRASP2Q96D09 838 aa21.09■□□□□ 0.97
CDX4-201ENST00000373514 UPF3AQ9H1J1 476 aaKnown RBP21.09■□□□□ 0.97
CDX4-201ENST00000373514 WNT7AO00755 349 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 DYNC1LI2O43237 492 aaPredicted RBP21.08■□□□□ 0.96
CDX4-201ENST00000373514 FIBPO43427 364 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 C6orf222P0C671 652 aaPredicted RBP21.08■□□□□ 0.96
CDX4-201ENST00000373514 ARP10275 920 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 ICAM3P32942 547 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 ZNF76P36508 570 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 ARHGAP1Q07960 439 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 LRRC41Q15345 812 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 SAFBQ15424 915 aaKnown RBP eCLIP21.08■□□□□ 0.96
CDX4-201ENST00000373514 CEP55Q53EZ4 464 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 LARP1BQ659C4 914 aaKnown RBP21.08■□□□□ 0.96
CDX4-201ENST00000373514 NLRX1Q86UT6 975 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 OR6J1Q8NGC5 347 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 JADE2Q9NQC1 790 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 TELO2Q9Y4R8 837 aa21.08■□□□□ 0.96
CDX4-201ENST00000373514 SPATA31C2B4DYI2 1134 aa21.07■□□□□ 0.96
CDX4-201ENST00000373514 ATP9AO75110 1047 aa21.07■□□□□ 0.96
CDX4-201ENST00000373514 GJA9P57773 515 aa21.07■□□□□ 0.96
CDX4-201ENST00000373514 H3BQV1 296 aa21.06■□□□□ 0.96
CDX4-201ENST00000373514 GGPS1O95749 300 aa21.06■□□□□ 0.96
CDX4-201ENST00000373514 LETM2Q2VYF4 491 aa21.06■□□□□ 0.96
CDX4-201ENST00000373514 PRR16Q569H4 304 aa21.06■□□□□ 0.96
CDX4-201ENST00000373514 IFFO2Q5TF58 517 aa21.06■□□□□ 0.96
CDX4-201ENST00000373514 PLA2G4DQ86XP0 818 aa21.06■□□□□ 0.96
CDX4-201ENST00000373514 LENG9Q96B70 501 aa21.06■□□□□ 0.96
CDX4-201ENST00000373514 KCNH7Q9NS40 1196 aa21.06■□□□□ 0.96
CDX4-201ENST00000373514 VPS37CA5D8V6 355 aaPredicted RBP21.05■□□□□ 0.96
CDX4-201ENST00000373514 GH1P01241 217 aa21.05■□□□□ 0.96
CDX4-201ENST00000373514 KCNA2P16389 499 aa21.05■□□□□ 0.96
CDX4-201ENST00000373514 CIITAP33076 1130 aa21.05■□□□□ 0.96
CDX4-201ENST00000373514 GNL2Q13823 731 aaKnown RBP21.05■□□□□ 0.96
CDX4-201ENST00000373514 MCTP1Q6DN14 999 aa21.05■□□□□ 0.96
CDX4-201ENST00000373514 NEK8Q86SG6 692 aa21.05■□□□□ 0.96
CDX4-201ENST00000373514 FOXP1Q9H334 677 aaPredicted RBP21.05■□□□□ 0.96
CDX4-201ENST00000373514 MEIS1O00470 390 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 NKRFO15226 690 aaKnown RBP eCLIP21.04■□□□□ 0.96
CDX4-201ENST00000373514 SLC37A4O43826 429 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 FARP2O94887 1054 aaPredicted RBP21.04■□□□□ 0.96
CDX4-201ENST00000373514 USP11P51784 963 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 NUCB2P80303 420 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 FSCN1Q16658 493 aaKnown RBP21.04■□□□□ 0.96
CDX4-201ENST00000373514 NOSTRINQ8IVI9 506 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 GJA10Q969M2 543 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 AP5M1Q9H0R1 490 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 Q9Y3F1 56 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 SYT1P21579 422 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 SP4Q02446 784 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 ITGB3BPQ13352 177 aaPredicted RBP21.04■□□□□ 0.96
CDX4-201ENST00000373514 PKP1Q13835 747 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 CELF3Q5SZQ8 465 aaKnown RBP21.04■□□□□ 0.96
CDX4-201ENST00000373514 CCSAPQ6IQ19 270 aaPredicted RBP21.04■□□□□ 0.96
CDX4-201ENST00000373514 KCNV1Q6PIU1 500 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 CYFIP1Q7L576 1253 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 NIPA1Q7RTP0 329 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 DHX37Q8IY37 1157 aaKnown RBP21.04■□□□□ 0.96
CDX4-201ENST00000373514 KLHDC9Q8NEP7 349 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 AFG1LQ8WV93 481 aa21.04■□□□□ 0.96
CDX4-201ENST00000373514 AGO4Q9HCK5 861 aaKnown RBP21.04■□□□□ 0.96
CDX4-201ENST00000373514 DNM1LO00429 736 aa21.03■□□□□ 0.96
CDX4-201ENST00000373514 U2AF2P26368 475 aaKnown RBP eCLIP21.03■□□□□ 0.96
CDX4-201ENST00000373514 CST5P28325 142 aaPredicted RBP21.03■□□□□ 0.96
CDX4-201ENST00000373514 SETQ01105 290 aaPredicted RBP21.03■□□□□ 0.96
CDX4-201ENST00000373514 MYSM1Q5VVJ2 828 aa21.03■□□□□ 0.96
CDX4-201ENST00000373514 RNF180Q86T96 592 aa21.03■□□□□ 0.96
CDX4-201ENST00000373514 SCN10AQ9Y5Y9 1956 aa21.02■□□□□ 0.96
CDX4-201ENST00000373514 KBTBD13C9JR72 458 aa21.02■□□□□ 0.96
CDX4-201ENST00000373514 DDX39AO00148 427 aaKnown RBP21.02■□□□□ 0.96
CDX4-201ENST00000373514 CCNT1O60563 726 aaKnown RBP21.02■□□□□ 0.96
CDX4-201ENST00000373514 MMP3P08254 477 aa21.02■□□□□ 0.96
CDX4-201ENST00000373514 TGFB3P10600 412 aa21.02■□□□□ 0.96
CDX4-201ENST00000373514 ATP2B1P20020 1258 aa21.02■□□□□ 0.96
CDX4-201ENST00000373514 NBR1Q14596 966 aa21.02■□□□□ 0.96
CDX4-201ENST00000373514 KCNA10Q16322 511 aa21.02■□□□□ 0.96
CDX4-201ENST00000373514 HSDL1Q3SXM5 330 aa21.02■□□□□ 0.96
CDX4-201ENST00000373514 GNASQ5JWF2 1037 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms