RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 FRMPD4Q14CM0 1322 aa23.21■■□□□ 1.31
SYNC-201ENST00000373484 SEPT4O43236 478 aa23.21■■□□□ 1.31
SYNC-201ENST00000373484 EIF2AK2P19525 551 aaKnown RBP23.21■■□□□ 1.31
SYNC-201ENST00000373484 CNGA1P29973 690 aa23.21■■□□□ 1.31
SYNC-201ENST00000373484 UBE2SQ16763 222 aa23.21■■□□□ 1.31
SYNC-201ENST00000373484 CCDC148Q8NFR7 591 aa23.21■■□□□ 1.31
SYNC-201ENST00000373484 AIFM3Q96NN9 605 aa23.21■■□□□ 1.31
SYNC-201ENST00000373484 VPS54Q9P1Q0 977 aa23.21■■□□□ 1.31
SYNC-201ENST00000373484 ORC3Q9UBD5 711 aaPredicted RBP23.21■■□□□ 1.31
SYNC-201ENST00000373484 ZHX1Q9UKY1 873 aaPredicted RBP23.21■■□□□ 1.31
SYNC-201ENST00000373484 GOLGA6L4A6NEF3 574 aa23.2■■□□□ 1.3
SYNC-201ENST00000373484 FDPSP14324 419 aaKnown RBP23.2■■□□□ 1.3
SYNC-201ENST00000373484 PDE4DQ08499 809 aa23.2■■□□□ 1.3
SYNC-201ENST00000373484 DEFB118Q96PH6 123 aa23.2■■□□□ 1.3
SYNC-201ENST00000373484 PDCD2LQ9BRP1 358 aa23.2■■□□□ 1.3
SYNC-201ENST00000373484 PYCARDQ9ULZ3 195 aa23.2■■□□□ 1.3
SYNC-201ENST00000373484 POTEFA5A3E0 1075 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 PLA2G4DQ86XP0 818 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 SPATA32Q96LK8 384 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 LLPHQ9BRT6 129 aaKnown RBP23.19■■□□□ 1.3
SYNC-201ENST00000373484 ZSCAN16Q9H4T2 348 aaPredicted RBP23.19■■□□□ 1.3
SYNC-201ENST00000373484 C6orf50Q9HD87 102 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 VTA1Q9NP79 307 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 DDX20Q9UHI6 824 aaKnown RBP23.19■■□□□ 1.3
SYNC-201ENST00000373484 JAK2O60674 1132 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 MSCO60682 206 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 NR3C2P08235 984 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 GJA8P48165 433 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 PGM5Q15124 567 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 EEPD1Q7L9B9 569 aa23.19■■□□□ 1.3
SYNC-201ENST00000373484 FBXO16Q8IX29 292 aaPredicted RBP23.19■■□□□ 1.3
SYNC-201ENST00000373484 FAM177A1Q8N128 213 aaPredicted RBP23.19■■□□□ 1.3
SYNC-201ENST00000373484 U2AF1L4Q8WU68 220 aaKnown RBP23.19■■□□□ 1.3
SYNC-201ENST00000373484 LEO1Q8WVC0 666 aaPredicted RBP23.19■■□□□ 1.3
SYNC-201ENST00000373484 GTPBP4Q9BZE4 634 aaKnown RBP23.19■■□□□ 1.3
SYNC-201ENST00000373484 MYH7BA7E2Y1 1941 aa23.18■■□□□ 1.3
SYNC-201ENST00000373484 NEMFO60524 1076 aa23.18■■□□□ 1.3
SYNC-201ENST00000373484 SGPL1O95470 568 aa23.18■■□□□ 1.3
SYNC-201ENST00000373484 AKR1A1P14550 325 aa23.18■■□□□ 1.3
SYNC-201ENST00000373484 GNA11P29992 359 aa23.18■■□□□ 1.3
SYNC-201ENST00000373484 CLK2P49760 499 aaKnown RBP23.18■■□□□ 1.3
SYNC-201ENST00000373484 LHX8Q68G74 356 aa23.18■■□□□ 1.3
SYNC-201ENST00000373484 WASF1Q92558 559 aa23.18■■□□□ 1.3
SYNC-201ENST00000373484 CTAGE5O15320 804 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 LIG1P18858 919 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 SOX10P56693 466 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 STXBP2Q15833 593 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 CCDC144BQ3MJ40 725 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 ATL3Q6DD88 541 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 TAPT1Q6NXT6 567 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 IL31RAQ8NI17 732 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 CRISPLD2Q9H0B8 497 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 CBX8Q9HC52 389 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 SPDYE3A6NKU9 549 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 ZNF75DP51815 510 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 DMTNQ08495 405 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 SARM1Q6SZW1 724 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 DACT1Q9NYF0 836 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 FAM184BQ9ULE4 1060 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 PCDHA6Q9UN73 950 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 PAXBP1Q9Y5B6 917 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 PCDHA8Q9Y5H6 950 aa23.17■■□□□ 1.3
SYNC-201ENST00000373484 FOSP01100 380 aaPredicted RBP23.16■■□□□ 1.3
SYNC-201ENST00000373484 PLCB2Q00722 1185 aa23.16■■□□□ 1.3
SYNC-201ENST00000373484 AP3B2Q13367 1082 aa23.16■■□□□ 1.3
SYNC-201ENST00000373484 VSIG10LQ86VR7 867 aa23.16■■□□□ 1.3
SYNC-201ENST00000373484 PDGFCQ9NRA1 345 aa23.16■■□□□ 1.3
SYNC-201ENST00000373484 CFAP45Q9UL16 551 aa23.16■■□□□ 1.3
SYNC-201ENST00000373484 SMTNL1A8MU46 457 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 RIOK3O14730 519 aaKnown RBP23.15■■□□□ 1.3
SYNC-201ENST00000373484 ADAMTS3O15072 1205 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 CCND2P30279 289 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 NLRP5P59047 1200 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 C17orf53Q8N3J3 647 aaPredicted RBP23.15■■□□□ 1.3
SYNC-201ENST00000373484 BICD2Q8TD16 824 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 ALG1Q9BT22 464 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 RBM47A0AV96 593 aaKnown RBP23.15■■□□□ 1.3
SYNC-201ENST00000373484 ADCY6O43306 1168 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 EIF3JO75822 258 aaKnown RBP23.15■■□□□ 1.3
SYNC-201ENST00000373484 MYCLP12524 364 aaPredicted RBP23.15■■□□□ 1.3
SYNC-201ENST00000373484 CAPN2P17655 700 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 XBP1P17861 261 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 ADCYAP1R1P41586 468 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 ANO1Q5XXA6 986 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 REXO1Q8N1G1 1221 aaKnown RBP23.15■■□□□ 1.3
SYNC-201ENST00000373484 PDCL2Q8N4E4 241 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 TMEM260Q9NX78 707 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 OGDHLQ9ULD0 1010 aa23.15■■□□□ 1.3
SYNC-201ENST00000373484 EN2P19622 333 aaPredicted RBP23.14■■□□□ 1.29
SYNC-201ENST00000373484 NPY5RQ15761 445 aa23.14■■□□□ 1.29
SYNC-201ENST00000373484 ANO6Q4KMQ2 910 aa23.14■■□□□ 1.29
SYNC-201ENST00000373484 PHF20Q9BVI0 1012 aa23.14■■□□□ 1.29
SYNC-201ENST00000373484 ANO3Q9BYT9 981 aa23.14■■□□□ 1.29
SYNC-201ENST00000373484 EHMT1Q9H9B1 1298 aa23.14■■□□□ 1.29
SYNC-201ENST00000373484 PCDHA4Q9UN74 947 aa23.14■■□□□ 1.29
SYNC-201ENST00000373484 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.13■■□□□ 1.29
SYNC-201ENST00000373484 RARBP10826 455 aa23.13■■□□□ 1.29
SYNC-201ENST00000373484 MRPS9P82933 396 aaKnown RBP23.13■■□□□ 1.29
SYNC-201ENST00000373484 JAKMIP3Q5VZ66 844 aa23.13■■□□□ 1.29
SYNC-201ENST00000373484 PCNX4Q63HM2 1172 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms