RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PALMO75781 387 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 PPP1R37O75864 691 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
COL9A2-202ENST00000372748 IFT88Q13099 833 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 MAPKAPK5Q8IW41 473 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 CASKIN2Q8WXE0 1202 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 GDF3Q9NR23 364 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 LCA5LO95447 670 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 ARID5AQ03989 594 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 PAK2Q13177 524 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 BAP1Q92560 729 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 CCT8L2Q96SF2 557 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 PPANQ9NQ55 473 aaKnown RBP16.34■□□□□ 0.21
COL9A2-202ENST00000372748 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
COL9A2-202ENST00000372748 AHDC1Q5TGY3 1603 aaPredicted RBP16.34■□□□□ 0.21
COL9A2-202ENST00000372748 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.21
COL9A2-202ENST00000372748 E7EVH7 732 aa16.33■□□□□ 0.21
COL9A2-202ENST00000372748 TM4SF1P30408 202 aa16.33■□□□□ 0.21
COL9A2-202ENST00000372748 PTGISQ16647 500 aa16.33■□□□□ 0.21
COL9A2-202ENST00000372748 PTPROQ16827 1216 aa16.33■□□□□ 0.21
COL9A2-202ENST00000372748 CEP85LQ5SZL2 805 aa16.33■□□□□ 0.21
COL9A2-202ENST00000372748 MEX3CQ5U5Q3 659 aaKnown RBP16.33■□□□□ 0.21
COL9A2-202ENST00000372748 DGKHQ86XP1 1220 aa16.33■□□□□ 0.21
COL9A2-202ENST00000372748 KLHL7Q8IXQ5 586 aa16.33■□□□□ 0.21
COL9A2-202ENST00000372748 ZNF444Q8N0Y2 327 aaPredicted RBP16.33■□□□□ 0.21
COL9A2-202ENST00000372748 PROCA1Q8NCQ7 364 aaPredicted RBP16.33■□□□□ 0.21
COL9A2-202ENST00000372748 GLIS3Q8NEA6 775 aa16.33■□□□□ 0.21
COL9A2-202ENST00000372748 TNFRSF8P28908 595 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 GSCP56915 257 aaPredicted RBP16.33■□□□□ 0.2
COL9A2-202ENST00000372748 EHHADHQ08426 723 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 LRRC41Q15345 812 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 CNNM4Q6P4Q7 775 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 MYCBPAPQ8TBZ2 947 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 C7orf25Q9BPX7 421 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 CXorf56Q9H5V9 222 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 KANSL2Q9H9L4 492 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 VAT1LQ9HCJ6 419 aa16.33■□□□□ 0.2
COL9A2-202ENST00000372748 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 GRM4Q14833 912 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 NFIXQ14938 502 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 CENPPQ6IPU0 288 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 NLRP14Q86W24 1093 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 OR2W6PQ8NHA6 318 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 FSBPO95073 299 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 MDH1P40925 334 aaKnown RBP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 SETQ01105 290 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 MAN2A1Q16706 1144 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 GLE1Q53GS7 698 aaKnown RBP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 CCDC84Q86UT8 332 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 ATP6V1G3Q96LB4 118 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 PLAAQ9Y263 795 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 A6NNZ2 444 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 BACH1O14867 736 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 SF3B2Q13435 895 aaKnown RBP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 HLTFQ14527 1009 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 TUBB8Q3ZCM7 444 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 HGSNATQ68CP4 663 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 SPTY2D1Q68D10 685 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 MMTAG2Q9BU76 263 aaKnown RBP16.32■□□□□ 0.2
COL9A2-202ENST00000372748 SH3GLB2Q9NR46 395 aa16.32■□□□□ 0.2
COL9A2-202ENST00000372748 PJA2O43164 708 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 KLRC1P26715 233 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 TXKP42681 527 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-202ENST00000372748 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 MYMKA6NI61 221 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 STXBP3O00186 592 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 RAD51CO43502 376 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 BARGINQ6ZT62 677 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.31■□□□□ 0.2
COL9A2-202ENST00000372748 GOLPH3Q9H4A6 298 aa16.31■□□□□ 0.2
COL9A2-202ENST00000372748 LAMB1P07942 1786 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 KLRF2D3W0D1 207 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 TLR2O60603 784 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 AMPD3Q01432 767 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 MICALCLQ6ZW33 695 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 PACSIN1Q9BY11 444 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 COL5A3P25940 1745 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-202ENST00000372748 COL22A1Q8NFW1 1626 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-202ENST00000372748 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 PRPHP41219 470 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 KCNMA1Q12791 1236 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 ITGB3BPQ13352 177 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-202ENST00000372748 TMED8Q6PL24 325 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-202ENST00000372748 USP17L2Q6R6M4 530 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 DDX42Q86XP3 938 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL9A2-202ENST00000372748 CCDC13Q8IYE1 715 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
COL9A2-202ENST00000372748 BARHL2Q9NY43 387 aa16.3■□□□□ 0.2
COL9A2-202ENST00000372748 CCDC88AQ3V6T2 1871 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 NAPAP54920 295 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 DNAAF5Q86Y56 855 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 TBC1D5Q92609 795 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 BCCIPQ9P287 314 aaKnown RBP eCLIP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms