RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 LRRC71Q8N4P6 559 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 DNAJC5GQ8N7S2 189 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 NCAPGQ9BPX3 1015 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 MROH8Q9H579 483 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 MAPK8IP1Q9UQF2 711 aa7.91□□□□□ -1.14
USP1-202ENST00000371146 FAM155AB1AL88 458 aaPredicted RBP7.9□□□□□ -1.14
USP1-202ENST00000371146 USO1O60763 962 aaKnown RBP7.9□□□□□ -1.14
USP1-202ENST00000371146 CCND2P30279 289 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 TRAF1Q13077 416 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 PKP1Q13835 747 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 RINLQ6ZS11 566 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 TLK2Q86UE8 772 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 SLC38A10Q9HBR0 1119 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 PGAP2Q9UHJ9 254 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 USP20Q9Y2K6 914 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 ANKRD31Q8N7Z5 1873 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 RPAP1Q9BWH6 1393 aaPredicted RBP7.9□□□□□ -1.14
USP1-202ENST00000371146 POTEMA6NI47 508 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 PRPF40AO75400 957 aaKnown RBP7.9□□□□□ -1.14
USP1-202ENST00000371146 ICAM1P05362 532 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 CCT6AP40227 531 aaKnown RBP7.9□□□□□ -1.14
USP1-202ENST00000371146 TBC1D8BQ0IIM8 1120 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 SETDB1Q15047 1291 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 EXOC8Q8IYI6 725 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 MB21D1Q8N884 522 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 SYTL5Q8TDW5 730 aaPredicted RBP7.9□□□□□ -1.14
USP1-202ENST00000371146 SCLYQ96I15 445 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 TBC1D32Q96NH3 1257 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 TCP11L1Q9NUJ3 509 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 SETD4Q9NVD3 440 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 RGL1Q9NZL6 768 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 DDX25Q9UHL0 483 aaKnown RBP7.9□□□□□ -1.14
USP1-202ENST00000371146 PCDHA12Q9UN75 941 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 TUBGCP6Q96RT7 1819 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 USP54Q70EL1 1684 aa7.9□□□□□ -1.14
USP1-202ENST00000371146 VIRMAQ69YN4 1812 aaKnown RBP7.9□□□□□ -1.15
USP1-202ENST00000371146 ASB14A6NK59 587 aa7.9□□□□□ -1.15
USP1-202ENST00000371146 DDAH1O94760 285 aa7.9□□□□□ -1.15
USP1-202ENST00000371146 HMGCRP04035 888 aa7.9□□□□□ -1.15
USP1-202ENST00000371146 PDCP20941 246 aa7.9□□□□□ -1.15
USP1-202ENST00000371146 GRM4Q14833 912 aa7.9□□□□□ -1.15
USP1-202ENST00000371146 PAN2Q504Q3 1202 aaKnown RBP7.9□□□□□ -1.15
USP1-202ENST00000371146 FBXO46Q6PJ61 603 aaPredicted RBP7.9□□□□□ -1.15
USP1-202ENST00000371146 GPIHBP1Q8IV16 184 aa7.9□□□□□ -1.15
USP1-202ENST00000371146 GLYCTKQ8IVS8 523 aa7.9□□□□□ -1.15
USP1-202ENST00000371146 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.9□□□□□ -1.15
USP1-202ENST00000371146 CCDC66A2RUB6 948 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 INO80B-WBP1J3KQ70 363 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 SP100P23497 879 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 THPOP40225 353 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 HMGN5P82970 282 aaKnown RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 DNM1Q05193 864 aaKnown RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 MTA1Q13330 715 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 CALCRLQ16602 461 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 CT47A1Q5JQC4 288 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 RDH13Q8NBN7 331 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 TRIM6Q9C030 488 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 INO80BQ9C086 356 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 GABBR1Q9UBS5 961 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 MYH2Q9UKX2 1941 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 DOCK3Q8IZD9 2030 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 PDS5AQ29RF7 1337 aaKnown RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 BDP1A6H8Y1 2624 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 ZDBF2Q9HCK1 2354 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 LRRIQ4A6NIV6 560 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 M0QZ92 97 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 NRDCO43847 1150 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 ARP10275 920 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 TXLNAP40222 546 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 LIFRP42702 1097 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 ZNF200P98182 395 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 PPP4R3AQ6IN85 833 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 C17orf99Q6UX52 265 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 DPH6Q7L8W6 267 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 NECAB2Q7Z6G3 386 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 RETREG2Q8NC44 543 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 ARRDC4Q8NCT1 418 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 SPATA32Q96LK8 384 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 SH2B1Q9NRF2 756 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 CYP39A1Q9NYL5 469 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 NR2E3Q9Y5X4 410 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 COL11A2P13942 1736 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 WNK3Q9BYP7 1800 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 PP2D1A8MPX8 630 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 DCDC2CA8MYV0 355 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 STX6O43752 255 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 FGFR4P22455 802 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 TM4SF4P48230 202 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 KCNA10Q16322 511 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 TPD52L1Q16890 204 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 TYW1BQ6NUM6 668 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 SNX29Q8TEQ0 813 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 SCFD2Q8WU76 684 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 DHX58Q96C10 678 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 CLIC6Q96NY7 704 aa7.89□□□□□ -1.15
USP1-202ENST00000371146 TTC12Q9H892 705 aaPredicted RBP7.89□□□□□ -1.15
USP1-202ENST00000371146 IPO5O00410 1097 aaKnown RBP7.88□□□□□ -1.15
USP1-202ENST00000371146 STRNO43815 780 aa7.88□□□□□ -1.15
USP1-202ENST00000371146 ASGR1P07306 291 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms