RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TAAR1Q96RJ0 339 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 UBAC1Q9BSL1 405 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 MTG1Q9BT17 334 aaPredicted RBP17.14■□□□□ 0.33
LMO4-201ENST00000370542 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
LMO4-201ENST00000370542 MAP3K20Q9NYL2 800 aaKnown RBP17.14■□□□□ 0.33
LMO4-201ENST00000370542 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 MRPL11Q9Y3B7 192 aaKnown RBP17.14■□□□□ 0.33
LMO4-201ENST00000370542 MYH6P13533 1939 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 SUPT20HL2P0C7V6 817 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 TXNP10599 105 aaKnown RBP17.13■□□□□ 0.33
LMO4-201ENST00000370542 HSD17B4P51659 736 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 PTH1RQ03431 593 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 PTPN11Q06124 597 aaPredicted RBP17.13■□□□□ 0.33
LMO4-201ENST00000370542 TTLL4Q14679 1199 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 BRDTQ58F21 947 aaPredicted RBP17.13■□□□□ 0.33
LMO4-201ENST00000370542 SAMD3Q8N6K7 520 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 COPS5Q92905 334 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 INTS4Q96HW7 963 aaKnown RBP17.13■□□□□ 0.33
LMO4-201ENST00000370542 PBX4Q9BYU1 374 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 TSPY26PQ9H489 355 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 FAM13BQ9NYF5 915 aa17.13■□□□□ 0.33
LMO4-201ENST00000370542 KIAA1217Q5T5P2 1943 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 SGSM2O43147 1006 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 FGBP02675 491 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 SLC35G1Q2M3R5 365 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 NBPF20Q3BBV1 942 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 MYRIPQ8NFW9 859 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 RUFY2Q8WXA3 655 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
LMO4-201ENST00000370542 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 PRDM4Q9UKN5 801 aa17.12■□□□□ 0.33
LMO4-201ENST00000370542 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
LMO4-201ENST00000370542 KLRF2D3W0D1 207 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 PPP1R11O60927 126 aaPredicted RBP17.11■□□□□ 0.33
LMO4-201ENST00000370542 GTF2F1P35269 517 aaKnown RBP eCLIP17.11■□□□□ 0.335e-11■■■■□ 24.4
LMO4-201ENST00000370542 PBX2P40425 430 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 TROAPQ12815 778 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 STXBP2Q15833 593 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 STOX1Q6ZVD7 989 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 SESTD1Q86VW0 696 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 RPUSD2Q8IZ73 545 aaKnown RBP17.11■□□□□ 0.33
LMO4-201ENST00000370542 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 RMDN3Q96TC7 470 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 TRMT13Q9NUP7 481 aaKnown RBP17.11■□□□□ 0.33
LMO4-201ENST00000370542 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.11■□□□□ 0.33
LMO4-201ENST00000370542 MYO9BQ13459 2157 aa17.11■□□□□ 0.33
LMO4-201ENST00000370542 GRXCR1A8MXD5 290 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 ZBTB5O15062 677 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
LMO4-201ENST00000370542 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
LMO4-201ENST00000370542 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
LMO4-201ENST00000370542 PFKMP08237 780 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 MYL3P08590 195 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 CCL23P55773 120 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 ANAPC15P60006 121 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 TFF2Q03403 129 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 GRM4Q14833 912 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 GTPBP4Q9BZE4 634 aaKnown RBP17.1■□□□□ 0.33
LMO4-201ENST00000370542 TSPYL2Q9H2G4 693 aaPredicted RBP17.1■□□□□ 0.33
LMO4-201ENST00000370542 MTIF3Q9H2K0 278 aaKnown RBP17.1■□□□□ 0.33
LMO4-201ENST00000370542 VAT1LQ9HCJ6 419 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 GPHNQ9NQX3 736 aaPredicted RBP17.1■□□□□ 0.33
LMO4-201ENST00000370542 PXMP2Q9NR77 195 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
LMO4-201ENST00000370542 TAF6LQ9Y6J9 622 aa17.1■□□□□ 0.33
LMO4-201ENST00000370542 E7EWF7 191 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 GH1P01241 217 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 NR3C2P08235 984 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
LMO4-201ENST00000370542 IGFBP4P22692 258 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 KCNQ1P51787 676 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 TRDNQ13061 729 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 LY6KQ17RY6 165 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 AAK1Q2M2I8 961 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 KAT2BQ92831 832 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 CTAGE1Q96RT6 745 aa17.09■□□□□ 0.33
LMO4-201ENST00000370542 BAZ2BQ9UIF8 2168 aaKnown RBP17.08■□□□□ 0.33
LMO4-201ENST00000370542 CYTH3O43739 400 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 RGS20O76081 388 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 MMP3P08254 477 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 CYP2C9P11712 490 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 RBM10P98175 930 aaKnown RBP17.08■□□□□ 0.32
LMO4-201ENST00000370542 RAB30Q15771 203 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 IGDCC4Q8TDY8 1250 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 AFG1LQ8WV93 481 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 SCLYQ96I15 445 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 MAP3K14Q99558 947 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 PDCD2LQ9BRP1 358 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 MTA3Q9BTC8 594 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 SENP2Q9HC62 589 aa17.08■□□□□ 0.32
LMO4-201ENST00000370542 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
LMO4-201ENST00000370542 CFBP00751 764 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 RFC2P35250 354 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 ANTXR2P58335 489 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms