RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 MYCP01106 439 aaPredicted RBP17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 SMPD1P17405 629 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 LETM2Q2VYF4 491 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 Q4G0T1 1027 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 LHX8Q68G74 356 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 GIMAP8Q8ND71 665 aaPredicted RBP17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 DEFB118Q96PH6 123 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 SENP7Q9BQF6 1050 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 TSHZ2Q9NRE2 1034 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 NOL7Q9UMY1 257 aaKnown RBP17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 ORC2Q13416 577 aaPredicted RBP17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 NEDD9Q14511 834 aa17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 BRAPQ7Z569 592 aa17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 PLA2G4DQ86XP0 818 aa17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 CYP2W1Q8TAV3 490 aa17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 MBOAT7Q96N66 472 aa17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 SPC25Q9HBM1 224 aa17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 XPNPEP3Q9NQH7 507 aa17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 KCNH7Q9NS40 1196 aa17.65■□□□□ 0.42
PRPF38B-202ENST00000370022 KIAA1217Q5T5P2 1943 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 FAM205CA6NFA0 338 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 EDIL3O43854 480 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 CCNT1O60563 726 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 ARIH2O95376 493 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 SGPL1O95470 568 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 GJA8P48165 433 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 SEMA3FQ13275 785 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 PRR16Q569H4 304 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 U2AF1L4Q8WU68 220 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 EMID1Q96A84 441 aaPredicted RBP17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 CRISPLD2Q9H0B8 497 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 AP5M1Q9H0R1 490 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 DDX25Q9UHL0 483 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 MTMR6Q9Y217 621 aa17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 RBM19Q9Y4C8 960 aaKnown RBP17.64■□□□□ 0.41
PRPF38B-202ENST00000370022 ADCY6O43306 1168 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 TDP2O95551 362 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 GH1P01241 217 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 UBA1P22314 1058 aaKnown RBP17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 GJA9P57773 515 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 NKX3-2P78367 333 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 RILPL1Q5EBL4 403 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 TLK2Q86UE8 772 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 LENG9Q96B70 501 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 UPF3AQ9H1J1 476 aaKnown RBP17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 ZSCAN16Q9H4T2 348 aaPredicted RBP17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 OGDHLQ9ULD0 1010 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 MYH7BA7E2Y1 1941 aa17.63■□□□□ 0.41
PRPF38B-202ENST00000370022 LAMC2Q13753 1193 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 DHX37Q8IY37 1157 aaKnown RBP17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 ARRDC4Q8NCT1 418 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 AGO4Q9HCK5 861 aaKnown RBP17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 NFASCO94856 1347 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 SYNRGQ9UMZ2 1314 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 ARP10275 920 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 KCNA2P16389 499 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 SP2Q02086 613 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 BRDTQ58F21 947 aaPredicted RBP17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 CELF3Q5SZQ8 465 aaKnown RBP17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 ANO1Q5XXA6 986 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 METTL7BQ6UX53 244 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 RNF180Q86T96 592 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 OR6J1Q8NGC5 347 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 SDF4Q9BRK5 362 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 ZNF577Q9BSK1 485 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 TBC1D22BQ9NU19 505 aa17.62■□□□□ 0.41
PRPF38B-202ENST00000370022 CCDC85CA6NKD9 419 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 IPO5O00410 1097 aaKnown RBP17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 TBX3O15119 743 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 DYNC1LI2O43237 492 aaPredicted RBP17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 ADAMTS4O75173 837 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 GGPS1O95749 300 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 TFRCP02786 760 aaKnown RBP17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 CST5P28325 142 aaPredicted RBP17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 CPT1AP50416 773 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 ARHGAP1Q07960 439 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 TTC38Q5R3I4 469 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 TMEM63BQ5T3F8 832 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 MYSM1Q5VVJ2 828 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 ANKLE1Q8NAG6 615 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 LENG1Q96BZ8 264 aaPredicted RBP17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
PRPF38B-202ENST00000370022 ATP9AO75110 1047 aa17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 FARP2O94887 1054 aaPredicted RBP17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 C6orf222P0C671 652 aaPredicted RBP17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 ZSCAN22P10073 491 aaPredicted RBP17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 GJC2Q5T442 439 aaPredicted RBP17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 FERMT3Q86UX7 667 aa17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 PPTC7Q8NI37 304 aa17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 COPS5Q92905 334 aa17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 FAM20AQ96MK3 541 aa17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 RIT2Q99578 217 aa17.6■□□□□ 0.41
PRPF38B-202ENST00000370022 CENPFP49454 3210 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 A6NJR5 290 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 MSH4O15457 936 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 SLC37A4O43826 429 aa17.59■□□□□ 0.41
PRPF38B-202ENST00000370022 ZEB2O60315 1214 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms