RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ERVK-9P63128 1117 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 ERVK-24P63145 666 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 GRB10Q13322 594 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 ANKRD35Q8N283 1001 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 SNX29Q8TEQ0 813 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 LRRC15Q8TF66 581 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 CALML4Q96GE6 196 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 CUEDC2Q9H467 287 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 JADE2Q9NQC1 790 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 TLL2Q9Y6L7 1015 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 SLC26A4O43511 780 aa26.87■■□□□ 1.89
SNX3-203ENST00000368979 PSMD10O75832 226 aa26.87■■□□□ 1.89
SNX3-203ENST00000368979 CCND2P30279 289 aa26.87■■□□□ 1.89
SNX3-203ENST00000368979 STX1AQ16623 288 aa26.87■■□□□ 1.89
SNX3-203ENST00000368979 SHCBP1Q8NEM2 672 aa26.87■■□□□ 1.89
SNX3-203ENST00000368979 SMCR8Q8TEV9 937 aaPredicted RBP26.87■■□□□ 1.89
SNX3-203ENST00000368979 PNMA5Q96PV4 448 aa26.87■■□□□ 1.89
SNX3-203ENST00000368979 NUDT12Q9BQG2 462 aa26.87■■□□□ 1.89
SNX3-203ENST00000368979 PCDHA5Q9Y5H7 936 aa26.87■■□□□ 1.89
SNX3-203ENST00000368979 NR3C2P08235 984 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 HYIQ5T013 277 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 L1TD1Q5T7N2 865 aaKnown RBP26.86■■□□□ 1.89
SNX3-203ENST00000368979 NT5DC1Q5TFE4 455 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 VSIG10LQ86VR7 867 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 DNERQ8NFT8 737 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 SPATA20Q8TB22 786 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 MTRQ99707 1265 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 ZNF577Q9BSK1 485 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 R3HDMLQ9H3Y0 253 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 MAGEF1Q9HAY2 307 aa26.86■■□□□ 1.89
SNX3-203ENST00000368979 SLC10A3P09131 477 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 MYCLP12524 364 aaPredicted RBP26.85■■□□□ 1.89
SNX3-203ENST00000368979 AFMP43652 599 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 GCLCP48506 637 aaPredicted RBP26.85■■□□□ 1.89
SNX3-203ENST00000368979 SARSP49591 514 aaKnown RBP26.85■■□□□ 1.89
SNX3-203ENST00000368979 ZRSR1Q15695 479 aaKnown RBP26.85■■□□□ 1.89
SNX3-203ENST00000368979 ANO6Q4KMQ2 910 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 TMEM119Q4V9L6 283 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 PARK7Q99497 189 aaKnown RBP26.85■■□□□ 1.89
SNX3-203ENST00000368979 PLIN2Q99541 437 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 WDR11Q9BZH6 1224 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 MROH8Q9H579 483 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 KCNH7Q9NS40 1196 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 KDM3AQ9Y4C1 1321 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 MANSC4A6NHS7 340 aaPredicted RBP26.85■■□□□ 1.89
SNX3-203ENST00000368979 LRCH2Q5VUJ6 765 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 ANO10Q9NW15 660 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 MORF4L1Q9UBU8 362 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 STK24Q9Y6E0 443 aa26.85■■□□□ 1.89
SNX3-203ENST00000368979 ASTN1O14525 1302 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 DPYDQ12882 1025 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 PPP2R5CQ13362 524 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 MTMR1Q13613 665 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 NCAPH2Q6IBW4 605 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 OTOP1Q7RTM1 612 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 GPRC5AQ8NFJ5 357 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 RIT2Q99578 217 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 KBTBD4Q9NVX7 518 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 STK17AQ9UEE5 414 aa26.84■■□□□ 1.89
SNX3-203ENST00000368979 A0A087WWV3 80 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 IPO5O00410 1097 aaKnown RBP26.83■■□□□ 1.89
SNX3-203ENST00000368979 NLRP12P59046 1061 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 CNTN2Q02246 1040 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 HAUS3Q68CZ6 603 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 B3GNT9Q6UX72 402 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 FAM133AQ8N9E0 248 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 RNF214Q8ND24 703 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 SMARCE1Q969G3 411 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 CDK5RAP3Q96JB5 506 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 IWS1Q96ST2 819 aa26.83■■□□□ 1.89
SNX3-203ENST00000368979 AGO4Q9HCK5 861 aaKnown RBP26.83■■□□□ 1.89
SNX3-203ENST00000368979 GTPBP6O43824 516 aaPredicted RBP26.82■■□□□ 1.88
SNX3-203ENST00000368979 GAS7O60861 476 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 STAM2O75886 525 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 CCT6AP40227 531 aaKnown RBP26.82■■□□□ 1.88
SNX3-203ENST00000368979 ECM1Q16610 540 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 ERMNQ8TAM6 284 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 STAMQ92783 540 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 GPRASP2Q96D09 838 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 INPP4AQ96PE3 977 aaPredicted RBP26.82■■□□□ 1.88
SNX3-203ENST00000368979 TEKT3Q9BXF9 490 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 DNAJC25Q9H1X3 360 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 ZCCHC17Q9NP64 241 aaKnown RBP26.82■■□□□ 1.88
SNX3-203ENST00000368979 BLOC1S4Q9NUP1 217 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 LRRC37A2A6NM11 1700 aa26.82■■□□□ 1.88
SNX3-203ENST00000368979 POTEB2H3BUK9 544 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 BIN1O00499 593 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 SMC2O95347 1197 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 CAVIN2O95810 425 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 ALDH5A1P51649 535 aaPredicted RBP26.81■■□□□ 1.88
SNX3-203ENST00000368979 CCNA1P78396 465 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 C11orf57Q6ZUT1 292 aaPredicted RBP26.81■■□□□ 1.88
SNX3-203ENST00000368979 ANKRD13CQ8N6S4 541 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 FAM200AQ8TCP9 573 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 NT5C3AQ9H0P0 336 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 PORCNQ9H237 461 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 MAN1B1Q9UKM7 699 aa26.81■■□□□ 1.88
SNX3-203ENST00000368979 SOWAHBA6NEL2 793 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 FAM155AB1AL88 458 aaPredicted RBP26.8■■□□□ 1.88
SNX3-203ENST00000368979 MED24O75448 989 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms