RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 TRIML1Q8N9V2 468 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 FAM71BQ8TC56 605 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 NLRP4Q96MN2 994 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 LRRC4Q9HBW1 653 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 NPC1L1Q9UHC9 1359 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 ZNF233A6NK53 670 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 MED7O43513 233 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 FTOQ9C0B1 505 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNX27-203ENST00000368843 FIS1Q9Y3D6 152 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 COPB1P53618 953 aaKnown RBP19.48■□□□□ 0.71
SNX27-203ENST00000368843 OLA1Q9NTK5 396 aaKnown RBP19.48■□□□□ 0.71
SNX27-203ENST00000368843 ARAP3Q8WWN8 1544 aa19.48■□□□□ 0.71
SNX27-203ENST00000368843 C21orf2O43822 256 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 HOXA13P31271 388 aaPredicted RBP19.47■□□□□ 0.71
SNX27-203ENST00000368843 CDHR1Q96JP9 859 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 PPP2R2CQ9Y2T4 447 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 CD58P19256 250 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 DDIT3P35638 169 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 SPDYE1Q8NFV5 336 aaPredicted RBP19.47■□□□□ 0.71
SNX27-203ENST00000368843 INHBAP08476 426 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 KCTD6Q8NC69 237 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 KRT33BQ14525 404 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 RTKN2Q8IZC4 609 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 CHAMP1Q96JM3 812 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 SETD1BQ9UPS6 1966 aaKnown RBP19.47■□□□□ 0.71
SNX27-203ENST00000368843 ADD2P35612 726 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 PDE1BQ01064 536 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 EHHADHQ08426 723 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 PPP2R5EQ16537 467 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 MAGEF1Q9HAY2 307 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 KLHL14Q9P2G3 628 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 ZMYM1Q5SVZ6 1142 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 PDXDC2PQ6P474 469 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 DSTYKQ6XUX3 929 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 DNAAF3Q8N9W5 541 aa19.47■□□□□ 0.71
SNX27-203ENST00000368843 DHX36Q9H2U1 1008 aaKnown RBP19.47■□□□□ 0.71
SNX27-203ENST00000368843 DBNLQ9UJU6 430 aaKnown RBP19.47■□□□□ 0.71
SNX27-203ENST00000368843 EFCAB6Q5THR3 1501 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 ZNF445P59923 1031 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 SEPT12Q8IYM1 358 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 SIX6OS1Q8N1H7 587 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 TTC30BQ8N4P2 665 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 BBOF1Q8ND07 529 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 HEXIM2Q96MH2 286 aaKnown RBP19.46■□□□□ 0.71
SNX27-203ENST00000368843 TUBGCP2Q9BSJ2 902 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 SMYD4Q8IYR2 804 aaPredicted RBP19.46■□□□□ 0.71
SNX27-203ENST00000368843 RNF139Q8WU17 664 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 RPGRIP1Q96KN7 1286 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 RPF1Q9H9Y2 349 aaKnown RBP19.46■□□□□ 0.71
SNX27-203ENST00000368843 UGGT1Q9NYU2 1555 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 TTLL6Q8N841 843 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 NLRP1Q9C000 1473 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 ARHGAP25P42331 645 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 FAM49AQ9H0Q0 323 aaPredicted RBP19.46■□□□□ 0.71
SNX27-203ENST00000368843 FOXP1Q9H334 677 aaPredicted RBP19.46■□□□□ 0.71
SNX27-203ENST00000368843 PNMA3Q9UL41 463 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 SLC8A2Q9UPR5 921 aa19.46■□□□□ 0.71
SNX27-203ENST00000368843 KRT1P04264 644 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 MECOMQ03112 1051 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 CDC37Q16543 378 aaPredicted RBP19.45■□□□□ 0.7
SNX27-203ENST00000368843 PPP4R4Q6NUP7 873 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 UBE2TQ9NPD8 197 aaPredicted RBP19.45■□□□□ 0.7
SNX27-203ENST00000368843 PPFIA4O75335 1185 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 CPP00450 1065 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 ANKRD13CQ8N6S4 541 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 GDAP1Q8TB36 358 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 SLITRK6Q9H5Y7 841 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 C2orf69Q8N8R5 385 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 TMEM206Q9H813 350 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 BRD1O95696 1058 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 DBN1Q16643 649 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 HOMER3Q9NSC5 361 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 EIF2AK2P19525 551 aaKnown RBP19.45■□□□□ 0.7
SNX27-203ENST00000368843 TTC1Q99614 292 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 IFT122Q9HBG6 1241 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 OPHN1O60890 802 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 TRIM11Q96F44 468 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 LRGUKQ96M69 825 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 TMEM63CQ9P1W3 806 aa19.45■□□□□ 0.7
SNX27-203ENST00000368843 CYP2D7A0A087X1C5 515 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 KRT10P13645 584 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 ARL4AP40617 200 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 OR6B2Q6IFH4 312 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 EIF3CLB5ME19 914 aaKnown RBP19.44■□□□□ 0.7
SNX27-203ENST00000368843 MCF2LO15068 1137 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 THOC5Q13769 683 aaKnown RBP19.44■□□□□ 0.7
SNX27-203ENST00000368843 MAP3K21Q5TCX8 1036 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 WHAMMQ8TF30 809 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 EIF3CQ99613 913 aaKnown RBP19.44■□□□□ 0.7
SNX27-203ENST00000368843 HAUS8Q9BT25 410 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 MTMR6Q9Y217 621 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 DARS2Q6PI48 645 aaKnown RBP19.44■□□□□ 0.7
SNX27-203ENST00000368843 NLRP10Q86W26 655 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 MRPL46Q9H2W6 279 aaKnown RBP19.44■□□□□ 0.7
SNX27-203ENST00000368843 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 ZNF853P0CG23 659 aa19.44■□□□□ 0.7
SNX27-203ENST00000368843 EPHB1P54762 984 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms