RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
SNX27-201ENST00000368838 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 M0R2N6 131 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 ATMINO43313 823 aaPredicted RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 PQBP1O60828 265 aaKnown RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 PRPF40AO75400 957 aaKnown RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 ZNF865P0CJ78 1059 aaPredicted RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 RARBP10826 455 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 NCLP19338 710 aaKnown RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 ITGB8P26012 769 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 SNAP25P60880 206 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 SLC35G1Q2M3R5 365 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 DIS3L2Q8IYB7 885 aaKnown RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 LINC00301Q8NCQ3 95 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 LEO1Q8WVC0 666 aaPredicted RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 TEX13BQ9BXU2 312 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 PDLIM7Q9NR12 457 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 ZHX1Q9UKY1 873 aaPredicted RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 PNMA2Q9UL42 364 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 CTDP1Q9Y5B0 961 aaPredicted RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 DDX49Q9Y6V7 483 aaKnown RBP10.04□□□□□ -0.8
SNX27-201ENST00000368838 UNC80Q8N2C7 3258 aa10.04□□□□□ -0.8
SNX27-201ENST00000368838 EYSQ5T1H1 3165 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 A0A0C4DFX4 3053 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 SYNRGQ9UMZ2 1314 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 SCN5AQ14524 2016 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 MYADML2A6NDP7 307 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 ADCY6O43306 1168 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 SNAI1O95863 264 aaPredicted RBP10.03□□□□□ -0.8
SNX27-201ENST00000368838 FDX1P10109 184 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 PTGS1P23219 599 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 GNA11P29992 359 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 ZNF445P59923 1031 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 SLC39A14Q15043 492 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 ADALQ6DHV7 355 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 CCDC144CPQ8IYA2 1237 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 ELOA2Q8IYF1 753 aaPredicted RBP10.03□□□□□ -0.8
SNX27-201ENST00000368838 STAG2Q8N3U4 1231 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 SYAP1Q96A49 352 aaPredicted RBP10.03□□□□□ -0.8
SNX27-201ENST00000368838 RRP36Q96EU6 259 aaKnown RBP10.03□□□□□ -0.8
SNX27-201ENST00000368838 SPATA32Q96LK8 384 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 GUCD1Q96NT3 240 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 USP28Q96RU2 1077 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 PHOX2BQ99453 314 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 PHF24Q9UPV7 400 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 CNPY2Q9Y2B0 182 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 MYH7BA7E2Y1 1941 aa10.03□□□□□ -0.8
SNX27-201ENST00000368838 TRIP12Q14669 1992 aaPredicted RBP10.02□□□□□ -0.81
SNX27-201ENST00000368838 PNMA6FA0A0J9YX94 578 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 A0A1W2PQ45 241 aaPredicted RBP10.02□□□□□ -0.81
SNX27-201ENST00000368838 A0A1W2PQY0 241 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 TMEM232C9JQI7 657 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 ZBED4O75132 1171 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 LETM1O95202 739 aaPredicted RBP10.02□□□□□ -0.81
SNX27-201ENST00000368838 AKR1A1P14550 325 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 KRT2P35908 639 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 EPHB4P54760 987 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 IKQ13123 557 aaPredicted RBP10.02□□□□□ -0.81
SNX27-201ENST00000368838 SNX17Q15036 470 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 SLFN13Q68D06 897 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 GPR153Q6NV75 609 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 RNF180Q86T96 592 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 FERMT3Q86UX7 667 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 RAB11FIP4Q86YS3 637 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 PRPF38AQ8NAV1 312 aaKnown RBP10.02□□□□□ -0.81
SNX27-201ENST00000368838 BICD2Q8TD16 824 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 NPDC1Q9NQX5 325 aaPredicted RBP10.02□□□□□ -0.81
SNX27-201ENST00000368838 PCDHA4Q9UN74 947 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 CEP131Q9UPN4 1083 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 STXBP5LQ9Y2K9 1186 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 CDH23Q9H251 3354 aa10.02□□□□□ -0.81
SNX27-201ENST00000368838 DNAJC25-GNG10A0A024R161 153 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 KIF28PB7ZC32 967 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 ZBTB5O15062 677 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 ADAMTS4O75173 837 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 CLTBP09497 229 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 BMP3P12645 472 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 CLCN6P51797 869 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 CNTN2Q02246 1040 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 GHRHRQ02643 423 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 PTPAQ15257 358 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 CCDC174Q6PII3 467 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 KCTD1Q719H9 257 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 ANKRD35Q8N283 1001 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 SAMD3Q8N6K7 520 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 GPT2Q8TD30 523 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 FGD4Q96M96 766 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 AGBL1Q96MI9 1066 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 AIFM3Q96NN9 605 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 JMJD4Q9H9V9 463 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 SLC38A10Q9HBR0 1119 aa10.01□□□□□ -0.81
SNX27-201ENST00000368838 SEC63Q9UGP8 760 aaKnown RBP10.01□□□□□ -0.81
SNX27-201ENST00000368838 DIS3Q9Y2L1 958 aaKnown RBP10.01□□□□□ -0.81
SNX27-201ENST00000368838 TCHHQ07283 1943 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms