RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ASB2Q96Q27 587 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 ALG1Q9BT22 464 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 PNMA6FA0A0J9YX94 578 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 CXCL10P02778 98 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 ZNF286BP0CG31 522 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 CKBP12277 381 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 SP2Q02086 613 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 KIAA0753Q2KHM9 967 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 HSDL1Q3SXM5 330 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 RALYLQ86SE5 291 aaKnown RBP18.57■□□□□ 0.56
CKS1B-202ENST00000368436 MAP4K1Q92918 833 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 TTC28Q96AY4 2481 aa18.57■□□□□ 0.56
CKS1B-202ENST00000368436 KIF28PB7ZC32 967 aa18.56■□□□□ 0.56
CKS1B-202ENST00000368436 GGPS1O95749 300 aa18.56■□□□□ 0.56
CKS1B-202ENST00000368436 CCND2P30279 289 aa18.56■□□□□ 0.56
CKS1B-202ENST00000368436 ANTXR2P58335 489 aa18.56■□□□□ 0.56
CKS1B-202ENST00000368436 MRPS5P82675 430 aaKnown RBP18.56■□□□□ 0.56
CKS1B-202ENST00000368436 TAP1Q03518 808 aa18.56■□□□□ 0.56
CKS1B-202ENST00000368436 PTK7Q13308 1070 aa18.56■□□□□ 0.56
CKS1B-202ENST00000368436 SART3Q15020 963 aaKnown RBP18.56■□□□□ 0.56
CKS1B-202ENST00000368436 TRIM71Q2Q1W2 868 aaKnown RBP18.56■□□□□ 0.56
CKS1B-202ENST00000368436 IGDCC4Q8TDY8 1250 aa18.56■□□□□ 0.56
CKS1B-202ENST00000368436 FRMPD4Q14CM0 1322 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 RFXAPO00287 272 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 NBNO60934 754 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 ARHGEF15O94989 841 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 UBA1P22314 1058 aaKnown RBP18.55■□□□□ 0.56
CKS1B-202ENST00000368436 WDR5P61964 334 aaKnown RBP18.55■□□□□ 0.56
CKS1B-202ENST00000368436 CNKSR3Q6P9H4 555 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 TRAF7Q6Q0C0 670 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 FCHSD1Q86WN1 690 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 MB21D2Q8IYB1 491 aaPredicted RBP18.55■□□□□ 0.56
CKS1B-202ENST00000368436 SPATA33Q96N06 139 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 MAP3K14Q99558 947 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 C16orf70Q9BSU1 422 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
CKS1B-202ENST00000368436 DOCK5Q9H7D0 1870 aa18.54■□□□□ 0.56
CKS1B-202ENST00000368436 EPOPA6NHQ4 379 aa18.54■□□□□ 0.56
CKS1B-202ENST00000368436 KCNJ6P48051 423 aa18.54■□□□□ 0.56
CKS1B-202ENST00000368436 HIC1Q14526 733 aa18.54■□□□□ 0.56
CKS1B-202ENST00000368436 CATIPQ7Z7H3 387 aa18.54■□□□□ 0.56
CKS1B-202ENST00000368436 GPKOWQ92917 476 aaPredicted RBP eCLIP18.54■□□□□ 0.56
CKS1B-202ENST00000368436 WNT8BQ93098 351 aa18.54■□□□□ 0.56
CKS1B-202ENST00000368436 ZFP91Q96JP5 570 aaPredicted RBP18.54■□□□□ 0.56
CKS1B-202ENST00000368436 TSPYL2Q9H2G4 693 aaPredicted RBP18.54■□□□□ 0.56
CKS1B-202ENST00000368436 CERS4Q9HA82 394 aa18.54■□□□□ 0.56
CKS1B-202ENST00000368436 TRANK1O15050 2925 aa18.53■□□□□ 0.56
CKS1B-202ENST00000368436 PRRC2BQ5JSZ5 2229 aaKnown RBP18.53■□□□□ 0.56
CKS1B-202ENST00000368436 TNFRSF10AO00220 468 aa18.53■□□□□ 0.56
CKS1B-202ENST00000368436 STAM2O75886 525 aa18.53■□□□□ 0.56
CKS1B-202ENST00000368436 SMARCA1P28370 1054 aa18.53■□□□□ 0.56
CKS1B-202ENST00000368436 ICAM3P32942 547 aa18.53■□□□□ 0.56
CKS1B-202ENST00000368436 MRPS9P82933 396 aaKnown RBP18.53■□□□□ 0.56
CKS1B-202ENST00000368436 ZNF200P98182 395 aaPredicted RBP18.53■□□□□ 0.56
CKS1B-202ENST00000368436 TCTN1Q2MV58 587 aa18.53■□□□□ 0.56
CKS1B-202ENST00000368436 MTA3Q9BTC8 594 aa18.53■□□□□ 0.56
CKS1B-202ENST00000368436 MLXIPQ9HAP2 919 aa18.53■□□□□ 0.56
CKS1B-202ENST00000368436 ABHD14A-ACY1A0A1B0GW23 586 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 TLL1O43897 1013 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 SORBS3O60504 671 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 DEFB103AP81534 67 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 MBTPS1Q14703 1052 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 ZNF618Q5T7W0 954 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 SERINC5Q86VE9 423 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 ARNTL2Q8WYA1 636 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 INPP4AQ96PE3 977 aaPredicted RBP18.52■□□□□ 0.56
CKS1B-202ENST00000368436 SPZ1Q9BXG8 430 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 BCAS3Q9H6U6 928 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 LY9Q9HBG7 655 aa18.52■□□□□ 0.56
CKS1B-202ENST00000368436 RBM8AQ9Y5S9 174 aaKnown RBP18.52■□□□□ 0.56
CKS1B-202ENST00000368436 COL4A4P53420 1690 aaPredicted RBP18.51■□□□□ 0.55
CKS1B-202ENST00000368436 SPATA31C2B4DYI2 1134 aa18.51■□□□□ 0.55
CKS1B-202ENST00000368436 H3BRB1 525 aa18.51■□□□□ 0.55
CKS1B-202ENST00000368436 GTPBP6O43824 516 aaPredicted RBP18.51■□□□□ 0.55
CKS1B-202ENST00000368436 EFCAB14O75071 495 aa18.51■□□□□ 0.55
CKS1B-202ENST00000368436 HOXC8P31273 242 aa18.51■□□□□ 0.55
CKS1B-202ENST00000368436 GNPTABQ3T906 1256 aa18.51■□□□□ 0.55
CKS1B-202ENST00000368436 TMCO2Q7Z6W1 182 aaPredicted RBP18.51■□□□□ 0.55
CKS1B-202ENST00000368436 ZNF654Q8IZM8 581 aa18.51■□□□□ 0.55
CKS1B-202ENST00000368436 MICALL1Q8N3F8 863 aa18.51■□□□□ 0.55
CKS1B-202ENST00000368436 ADAMTS19Q8TE59 1207 aa18.51■□□□□ 0.55
CKS1B-202ENST00000368436 TUT1Q9H6E5 874 aaKnown RBP18.51■□□□□ 0.55
CKS1B-202ENST00000368436 TCF20Q9UGU0 1960 aaKnown RBP18.5■□□□□ 0.55
CKS1B-202ENST00000368436 LCHNA4D1U4 455 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 DDAH1O94760 285 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 LGALS2P05162 132 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 SEMA3FQ13275 785 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 IKBKEQ14164 716 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 SPRED2Q7Z698 418 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 CTCFLQ8NI51 663 aaPredicted RBP18.5■□□□□ 0.55
CKS1B-202ENST00000368436 PIBF1Q8WXW3 757 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 LZTS2Q9BRK4 669 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 MICAL3Q7RTP6 2002 aa18.5■□□□□ 0.55
CKS1B-202ENST00000368436 REV3LO60673 3130 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 PIK3CDO00329 1044 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 FIBPO43427 364 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 LPXNO60711 386 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 LGR5O75473 907 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 GJB5O95377 273 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 BMP1P13497 986 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms