RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CREG2Q8IUH2 290 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 CCDC65Q8IXS2 484 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 HAS1Q92839 578 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 LUC7LQ9NQ29 371 aaKnown RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 CEP72Q9P209 647 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 HPCAL4Q9UM19 191 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 PDE2AO00408 941 aaPredicted RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 N4BP1O75113 896 aaKnown RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 IVLP07476 585 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 PLEKP08567 350 aaPredicted RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 MAGEA1P43355 309 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 TNNT3P45378 269 aaPredicted RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 GYS2P54840 703 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 MCTP2Q6DN12 878 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 CACNA2D4Q7Z3S7 1137 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 KRT26Q7Z3Y9 468 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 KCNK18Q7Z418 384 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 SP8Q8IXZ3 490 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 CCDC17Q96LX7 622 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 NUDT12Q9BQG2 462 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 PANK4Q9NVE7 773 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 RNF14Q9UBS8 474 aa15.82■□□□□ 0.12
CD48-201ENST00000368045 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
CD48-201ENST00000368045 LRRC37AA6NMS7 1700 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 NKRFO15226 690 aaKnown RBP eCLIP15.81■□□□□ 0.12
CD48-201ENST00000368045 MARCH6O60337 910 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 PPP1R11O60927 126 aaPredicted RBP15.81■□□□□ 0.12
CD48-201ENST00000368045 GTF2IP78347 998 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 PICALMQ13492 652 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 MOXD1Q6UVY6 613 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 ZC3H3Q8IXZ2 948 aaKnown RBP15.81■□□□□ 0.12
CD48-201ENST00000368045 GOLGA6L1Q8N7Z2 621 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 PSTPIP2Q9H939 334 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 FAM184BQ9ULE4 1060 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 PCDHA12Q9UN75 941 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 CAPN6Q9Y6Q1 641 aa15.81■□□□□ 0.12
CD48-201ENST00000368045 TULP2O00295 520 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 ZNF185O15231 689 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 SERPING1P05155 500 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 HLA-DOAP06340 250 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 SHMT1P34896 483 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 USP11P51784 963 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 UBE2SQ16763 222 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 CCDC40Q4G0X9 1142 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 NOX5Q96PH1 765 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 OSBPL9Q96SU4 736 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 CRACR2AQ9BSW2 395 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 TSPYL1Q9H0U9 437 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 EHD4Q9H223 541 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 USP21Q9UK80 565 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 LTBP1Q14766 1721 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 CYP3A7-CYP3A51PA0A087WV96 503 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 TRAF5O00463 557 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 MOCS3O95396 460 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 CAPN2P17655 700 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 CYP3A7P24462 503 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 SLC9C1Q4G0N8 1177 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 AENQ8WTP8 325 aaKnown RBP15.8■□□□□ 0.12
CD48-201ENST00000368045 MBOAT7Q96N66 472 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 TANGO6Q9C0B7 1094 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 MLXIPQ9HAP2 919 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
CD48-201ENST00000368045 STK24Q9Y6E0 443 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 QSER1Q2KHR3 1735 aa15.8■□□□□ 0.12
CD48-201ENST00000368045 PITPNM2Q9BZ72 1349 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 ZC3H4Q9UPT8 1303 aaKnown RBP15.79■□□□□ 0.12
CD48-201ENST00000368045 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
CD48-201ENST00000368045 PPEF1O14829 653 aaPredicted RBP15.79■□□□□ 0.12
CD48-201ENST00000368045 RNF40O75150 1001 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 TNFRSF8P28908 595 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 PAFAH1B1P43034 410 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 C2orf54Q08AI8 447 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 LRRC41Q15345 812 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 ECM1Q16610 540 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 EDRF1Q3B7T1 1238 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 GLE1Q53GS7 698 aaKnown RBP15.79■□□□□ 0.12
CD48-201ENST00000368045 SFMBT2Q5VUG0 894 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 HGSNATQ68CP4 663 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 HHIPL2Q6UWX4 724 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 TRIM59Q8IWR1 403 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 SLFN12Q8IYM2 578 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 SPATA4Q8NEY3 305 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 SELENOOQ9BVL4 669 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 KCNMB3Q9NPA1 279 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 LRRC4BQ9NT99 713 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 USP40Q9NVE5 1235 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
CD48-201ENST00000368045 PCDHA2Q9Y5H9 948 aa15.79■□□□□ 0.12
CD48-201ENST00000368045 PRPF6O94906 941 aaKnown RBP15.78■□□□□ 0.12
CD48-201ENST00000368045 SYF2O95926 243 aaKnown RBP15.78■□□□□ 0.12
CD48-201ENST00000368045 PLA2G4BP0C869 781 aa15.78■□□□□ 0.12
CD48-201ENST00000368045 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
CD48-201ENST00000368045 KCNMA1Q12791 1236 aa15.78■□□□□ 0.12
CD48-201ENST00000368045 AP3B2Q13367 1082 aa15.78■□□□□ 0.12
CD48-201ENST00000368045 AFAP1L1Q8TED9 768 aa15.78■□□□□ 0.12
CD48-201ENST00000368045 DCAF4Q8WV16 495 aa15.78■□□□□ 0.12
CD48-201ENST00000368045 ATP6V0A2Q9Y487 856 aa15.78■□□□□ 0.12
CD48-201ENST00000368045 FRMD3A2A2Y4 597 aa15.77■□□□□ 0.12
CD48-201ENST00000368045 USP17L10C9JJH3 530 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms