RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 TLK2Q86UE8 772 aa17.66■□□□□ 0.42
PRKN-203ENST00000366894 NLRX1Q86UT6 975 aa17.66■□□□□ 0.42
PRKN-203ENST00000366894 VSIG10LQ86VR7 867 aa17.66■□□□□ 0.42
PRKN-203ENST00000366894 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
PRKN-203ENST00000366894 GPKOWQ92917 476 aaPredicted RBP eCLIP17.66■□□□□ 0.42
PRKN-203ENST00000366894 WDR11Q9BZH6 1224 aa17.66■□□□□ 0.42
PRKN-203ENST00000366894 VCANP13611 3396 aa17.66■□□□□ 0.42
PRKN-203ENST00000366894 DYNC1LI2O43237 492 aaPredicted RBP17.65■□□□□ 0.42
PRKN-203ENST00000366894 ARIH2O95376 493 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 ASGR1P07306 291 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 EIF2AK2P19525 551 aaKnown RBP17.65■□□□□ 0.42
PRKN-203ENST00000366894 SAFBQ15424 915 aaKnown RBP eCLIP17.65■□□□□ 0.42
PRKN-203ENST00000366894 PKN1Q16512 942 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 TRIM60Q495X7 471 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 GNASQ5JWF2 1037 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 PCNX4Q63HM2 1172 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 USP17L6PQ6QN14 398 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 REXO1Q8N1G1 1221 aaKnown RBP17.65■□□□□ 0.42
PRKN-203ENST00000366894 PCSK9Q8NBP7 692 aaKnown RBP17.65■□□□□ 0.42
PRKN-203ENST00000366894 GIMAP8Q8ND71 665 aaPredicted RBP17.65■□□□□ 0.42
PRKN-203ENST00000366894 PDCD2LQ9BRP1 358 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 PCDHA6Q9UN73 950 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 ATP11BQ9Y2G3 1177 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 PCDHA8Q9Y5H6 950 aa17.65■□□□□ 0.42
PRKN-203ENST00000366894 MYCLP12524 364 aaPredicted RBP17.64■□□□□ 0.41
PRKN-203ENST00000366894 PGM5Q15124 567 aa17.64■□□□□ 0.41
PRKN-203ENST00000366894 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
PRKN-203ENST00000366894 IL31RAQ8NI17 732 aa17.64■□□□□ 0.41
PRKN-203ENST00000366894 EYSQ5T1H1 3165 aa17.64■□□□□ 0.41
PRKN-203ENST00000366894 FSCN1Q16658 493 aaKnown RBP17.63■□□□□ 0.41
PRKN-203ENST00000366894 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
PRKN-203ENST00000366894 COPS5Q92905 334 aa17.63■□□□□ 0.41
PRKN-203ENST00000366894 ALG1Q9BT22 464 aa17.63■□□□□ 0.41
PRKN-203ENST00000366894 SEZ6LQ9BYH1 1024 aa17.63■□□□□ 0.41
PRKN-203ENST00000366894 PCDHA4Q9UN74 947 aa17.63■□□□□ 0.41
PRKN-203ENST00000366894 LTBP2Q14767 1821 aa17.63■□□□□ 0.41
PRKN-203ENST00000366894 KPNA6O60684 536 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 RGS20O76081 388 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 TXNP10599 105 aaKnown RBP17.62■□□□□ 0.41
PRKN-203ENST00000366894 ZNF76P36508 570 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 TLE2Q04725 743 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 CXCL17Q6UXB2 119 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 CCDC83Q8IWF9 413 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 NAP1L4Q99733 375 aaKnown RBP17.62■□□□□ 0.41
PRKN-203ENST00000366894 STARD7Q9NQZ5 370 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 ELP1O95163 1332 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 FRMPD4Q14CM0 1322 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 KIAA1217Q5T5P2 1943 aa17.62■□□□□ 0.41
PRKN-203ENST00000366894 PDIA4P13667 645 aaKnown RBP17.61■□□□□ 0.41
PRKN-203ENST00000366894 CPT1AP50416 773 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 CDK7P50613 346 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 USP11P51784 963 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 NEDD9Q14511 834 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 SEPT14Q6ZU15 432 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 SH3RF1Q7Z6J0 888 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 BLIDQ8IZY5 108 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 DAGLBQ8NCG7 672 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 NSUN7Q8NE18 718 aaKnown RBP17.61■□□□□ 0.41
PRKN-203ENST00000366894 PDLIM7Q9NR12 457 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 VPS54Q9P1Q0 977 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 MRVI1Q9Y6F6 885 aa17.61■□□□□ 0.41
PRKN-203ENST00000366894 FIBPO43427 364 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 CABYRO75952 493 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 CLK2P49760 499 aaKnown RBP17.6■□□□□ 0.41
PRKN-203ENST00000366894 LAMC2Q13753 1193 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 LY6KQ17RY6 165 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 TYW1BQ6NUM6 668 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 ANKRD33Q7Z3H0 272 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 KRT25Q7Z3Z0 450 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 OR6J1Q8NGC5 347 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 MAFAQ8NHW3 353 aaPredicted RBP17.6■□□□□ 0.41
PRKN-203ENST00000366894 GPRASP2Q96D09 838 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 TMX3Q96JJ7 454 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 GLT1D1Q96MS3 346 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 CDX2Q99626 313 aaPredicted RBP17.6■□□□□ 0.41
PRKN-203ENST00000366894 GRIN2DO15399 1336 aa17.6■□□□□ 0.41
PRKN-203ENST00000366894 CCDC194A0A1B0GVG4 234 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 TRIM43BA6NCK2 446 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 GH1P01241 217 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 UBE2SQ16763 222 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 NIPA1Q7RTP0 329 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 SLC43A3Q8NBI5 491 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 TRIM43Q96BQ3 446 aaPredicted RBP17.59■□□□□ 0.41
PRKN-203ENST00000366894 ZFP91Q96JP5 570 aaPredicted RBP17.59■□□□□ 0.41
PRKN-203ENST00000366894 C8orf76Q96K31 380 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 SENP7Q9BQF6 1050 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 ANO3Q9BYT9 981 aa17.59■□□□□ 0.41
PRKN-203ENST00000366894 PRDM5Q9NQX1 630 aaPredicted RBP17.59■□□□□ 0.41
PRKN-203ENST00000366894 DDX41Q9UJV9 622 aaKnown RBP17.59■□□□□ 0.41
PRKN-203ENST00000366894 A6NJR5 290 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 ARVCFO00192 962 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 PQBP1O60828 265 aaKnown RBP17.58■□□□□ 0.4
PRKN-203ENST00000366894 CTDNEP1O95476 244 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 CYP3A4P08684 503 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 PDCP20941 246 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 ITGB8P26012 769 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 ICAM3P32942 547 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 KRT2P35908 639 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 SREBF1P36956 1147 aa17.58■□□□□ 0.4
PRKN-203ENST00000366894 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms