RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 Q4G0T1 1027 aa13.8□□□□□ -0.2
CAPN9-203ENST00000366666 CEP55Q53EZ4 464 aa13.8□□□□□ -0.2
CAPN9-203ENST00000366666 PCNX4Q63HM2 1172 aa13.8□□□□□ -0.2
CAPN9-203ENST00000366666 TEX2Q8IWB9 1127 aa13.8□□□□□ -0.2
CAPN9-203ENST00000366666 PDILTQ8N807 584 aa13.8□□□□□ -0.2
CAPN9-203ENST00000366666 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
CAPN9-203ENST00000366666 FBXO40Q9UH90 709 aa13.8□□□□□ -0.2
CAPN9-203ENST00000366666 NR3C2P08235 984 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 PRPHP41219 470 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 MOXD1Q6UVY6 613 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 SAMD3Q8N6K7 520 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
CAPN9-203ENST00000366666 MMP19Q99542 508 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 FAM13BQ9NYF5 915 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 DNAJC25-GNG10A0A024R161 153 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 MEIS1O00470 390 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 LAD1O00515 517 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 RGS20O76081 388 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 BCRP11274 1271 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 INHBEP58166 350 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 FAM160A1Q05DH4 1040 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 FAM110CQ1W6H9 321 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 PLA2G4DQ86XP0 818 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 FAM133AQ8N9E0 248 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 ERCC4Q92889 916 aaPredicted RBP13.79□□□□□ -0.2
CAPN9-203ENST00000366666 NUDT12Q9BQG2 462 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 MXRA8Q9BRK3 442 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 MROH8Q9H579 483 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 PKD2L1Q9P0L9 805 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
CAPN9-203ENST00000366666 PFASO15067 1338 aa13.79□□□□□ -0.2
CAPN9-203ENST00000366666 SREBF2Q12772 1141 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 ORC2Q13416 577 aaPredicted RBP13.78□□□□□ -0.2
CAPN9-203ENST00000366666 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 VSIG10LQ86VR7 867 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 IGSF22Q8N9C0 903 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 NSUN6Q8TEA1 469 aaKnown RBP13.78□□□□□ -0.2
CAPN9-203ENST00000366666 LRRC15Q8TF66 581 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 GTF3C2Q8WUA4 911 aaPredicted RBP13.78□□□□□ -0.2
CAPN9-203ENST00000366666 EHMT1Q9H9B1 1298 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 KCNH3Q9ULD8 1083 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 UBIAD1Q9Y5Z9 338 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 FAM237AA0A1B0GTK4 181 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 TLR2O60603 784 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 COBLO75128 1261 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 ZNF202O95125 648 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 FCER1AP12319 257 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 ALDH5A1P51649 535 aaPredicted RBP13.78□□□□□ -0.2
CAPN9-203ENST00000366666 LONRF3Q496Y0 759 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 C17orf99Q6UX52 265 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 GPR142Q7Z601 462 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 SHCBP1Q8NEM2 672 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 PLIN2Q99541 437 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
CAPN9-203ENST00000366666 BCAS3Q9H6U6 928 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 KCNH7Q9NS40 1196 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
CAPN9-203ENST00000366666 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
CAPN9-203ENST00000366666 ATP9AO75110 1047 aa13.77□□□□□ -0.21
CAPN9-203ENST00000366666 CTGFP29279 349 aa13.77□□□□□ -0.21
CAPN9-203ENST00000366666 LONP1P36776 959 aaKnown RBP13.77□□□□□ -0.21
CAPN9-203ENST00000366666 SYKP43405 635 aa13.77□□□□□ -0.21
CAPN9-203ENST00000366666 SPIRE1Q08AE8 756 aa13.77□□□□□ -0.21
CAPN9-203ENST00000366666 NOGQ13253 232 aa13.77□□□□□ -0.21
CAPN9-203ENST00000366666 SEMA3FQ13275 785 aa13.77□□□□□ -0.21
CAPN9-203ENST00000366666 KCTD2Q14681 263 aa13.77□□□□□ -0.21
CAPN9-203ENST00000366666 KARSQ15046 597 aaKnown RBP13.77□□□□□ -0.21
CAPN9-203ENST00000366666 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
CAPN9-203ENST00000366666 ZCCHC17Q9NP64 241 aaKnown RBP13.77□□□□□ -0.21
CAPN9-203ENST00000366666 MGAMO43451 1857 aa13.77□□□□□ -0.21
CAPN9-203ENST00000366666 ADORA2AP29274 412 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 VEGFBP49765 207 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
CAPN9-203ENST00000366666 CCNA1P78396 465 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 NAP1L4Q99733 375 aaKnown RBP13.76□□□□□ -0.21
CAPN9-203ENST00000366666 HTTP42858 3142 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 FOXN1O15353 648 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 MARCH6O60337 910 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 ITGB3BPQ13352 177 aaPredicted RBP13.76□□□□□ -0.21
CAPN9-203ENST00000366666 ZRSR1Q15695 479 aaKnown RBP13.76□□□□□ -0.21
CAPN9-203ENST00000366666 EEPD1Q7L9B9 569 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 MYRIPQ8NFW9 859 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 JADE2Q9NQC1 790 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 VAV3Q9UKW4 847 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 TELO2Q9Y4R8 837 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 WDR81Q562E7 1941 aa13.76□□□□□ -0.21
CAPN9-203ENST00000366666 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
CAPN9-203ENST00000366666 KIF20AO95235 890 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 CCND2P30279 289 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 CAP1Q01518 475 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 MTMR1Q13613 665 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 ECM1Q16610 540 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 CKAP2LQ8IYA6 745 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 GRAMD1CQ8IYS0 662 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 SLC5A5Q92911 643 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 DHX58Q96C10 678 aa13.75□□□□□ -0.21
CAPN9-203ENST00000366666 ZNF577Q9BSK1 485 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms