RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 AFAP1L1Q8TED9 768 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 ALDH8A1Q9H2A2 487 aaPredicted RBP14.7□□□□□ -0.06
LDB3-202ENST00000361373 IQCA1LA6NCM1 817 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 MYO1FO00160 1098 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 MAN1A1P33908 653 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 LMNB2Q03252 620 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 STXBP2Q15833 593 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 ZNF34Q8IZ26 560 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 MCPH1Q8NEM0 835 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 TYW1Q9NV66 732 aaKnown RBP14.7□□□□□ -0.06
LDB3-202ENST00000361373 CLTCQ00610 1675 aaKnown RBP14.7□□□□□ -0.06
LDB3-202ENST00000361373 PTPRMP28827 1452 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 EIF3CLB5ME19 914 aaKnown RBP14.7□□□□□ -0.06
LDB3-202ENST00000361373 GPSM2P81274 684 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 SEMA3FQ13275 785 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 NEDD1Q8NHV4 660 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 GSDMBQ8TAX9 411 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 EIF3CQ99613 913 aaKnown RBP14.7□□□□□ -0.06
LDB3-202ENST00000361373 MXD3Q9BW11 206 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 KCNK3O14649 394 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 RIOK3O14730 519 aaKnown RBP14.7□□□□□ -0.06
LDB3-202ENST00000361373 EIF2AK2P19525 551 aaKnown RBP14.7□□□□□ -0.06
LDB3-202ENST00000361373 GRM4Q14833 912 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 BRD3Q15059 726 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 B4GALNT4Q76KP1 1039 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 PRDM10Q9NQV6 1147 aa14.7□□□□□ -0.06
LDB3-202ENST00000361373 ZNF233A6NK53 670 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 CASC4Q6P4E1 433 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 LRRC8AQ8IWT6 810 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 NSUN6Q8TEA1 469 aaKnown RBP14.69□□□□□ -0.06
LDB3-202ENST00000361373 WRNIP1Q96S55 665 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 KRIT1O00522 736 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 LDHAP00338 332 aaKnown RBP14.69□□□□□ -0.06
LDB3-202ENST00000361373 PLCG1P19174 1290 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 SLC12A2P55011 1212 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 KRT76Q01546 638 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 GABPAQ06546 454 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 GEN1Q17RS7 908 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 SCYL2Q6P3W7 929 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 TBC1D10CQ8IV04 446 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 ABT1Q9ULW3 272 aaKnown RBP14.69□□□□□ -0.06
LDB3-202ENST00000361373 MED7O43513 233 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 VIMP08670 466 aaKnown RBP14.69□□□□□ -0.06
LDB3-202ENST00000361373 PHBP35232 272 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 UBE2SQ16763 222 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 C10orf76Q5T2E6 689 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 PGBD1Q96JS3 809 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 ZNF512BQ96KM6 892 aaPredicted RBP14.69□□□□□ -0.06
LDB3-202ENST00000361373 DISC1Q9NRI5 854 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.69□□□□□ -0.06
LDB3-202ENST00000361373 PCDHB6Q9Y5E3 794 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 PFDN6O15212 129 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 PLEKHA8P1O95397 391 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 DENND2CQ68D51 928 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 MB21D2Q8IYB1 491 aaPredicted RBP14.69□□□□□ -0.06
LDB3-202ENST00000361373 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 PRPF38AQ8NAV1 312 aaKnown RBP14.69□□□□□ -0.06
LDB3-202ENST00000361373 MYRIPQ8NFW9 859 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 PCDHB4Q9Y5E5 795 aa14.69□□□□□ -0.06
LDB3-202ENST00000361373 PPRC1Q5VV67 1664 aaKnown RBP14.69□□□□□ -0.06
LDB3-202ENST00000361373 GNAT1P11488 350 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 TSGA10IPQ3SY00 556 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 TBC1D10BQ4KMP7 808 aaPredicted RBP14.68□□□□□ -0.06
LDB3-202ENST00000361373 DNAJC21Q5F1R6 531 aaKnown RBP14.68□□□□□ -0.06
LDB3-202ENST00000361373 STRIP1Q5VSL9 837 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 PSMB7Q99436 277 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 MAN1B1Q9UKM7 699 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 PCDHA6Q9UN73 950 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 PCDHA8Q9Y5H6 950 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 ZHX2Q9Y6X8 837 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 ZC3H13Q5T200 1668 aaKnown RBP14.68□□□□□ -0.06
LDB3-202ENST00000361373 RFX1P22670 979 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 MYO1EQ12965 1108 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 MTERF2Q49AM1 385 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 HHATQ5VTY9 493 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 SGMS1Q86VZ5 419 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 LRFN2Q9ULH4 789 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 ADAMTS13Q76LX8 1427 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 RINT1Q6NUQ1 792 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 ENAHQ8N8S7 591 aaPredicted RBP14.68□□□□□ -0.06
LDB3-202ENST00000361373 TSC1Q92574 1164 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 SNX25Q9H3E2 840 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 WDR64B1ANS9 1081 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 KIAA1586Q9HCI6 787 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 DDX41Q9UJV9 622 aaKnown RBP14.68□□□□□ -0.06
LDB3-202ENST00000361373 NEXMIFQ5QGS0 1516 aa14.68□□□□□ -0.06
LDB3-202ENST00000361373 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.67□□□□□ -0.06
LDB3-202ENST00000361373 SFNP31947 248 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 PSMC4P43686 418 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 MXI1P50539 228 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 SESTD1Q86VW0 696 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 PPANQ9NQ55 473 aaKnown RBP14.67□□□□□ -0.06
LDB3-202ENST00000361373 ZNRF3Q9ULT6 936 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 K7ERI5 159 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 ZBTB7AO95365 584 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 IFNB1P01574 187 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 CYP2D6P10635 497 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 KRT15P19012 456 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 SPON1Q9HCB6 807 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms