RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 KRT80Q6KB66 452 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 NOSTRINQ8IVI9 506 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 KCTD6Q8NC69 237 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 LMTK3Q96Q04 1460 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 KCNA4P22459 653 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 ALDH1B1P30837 517 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 GRAMD4Q6IC98 578 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 FANCLQ9NW38 375 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 DCPSQ96C86 337 aaKnown RBP12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 GEMIN8Q9NWZ8 242 aaKnown RBP12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 TMEM232C9JQI7 657 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 NSFP46459 744 aaKnown RBP12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 GTF2IP78347 998 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 TMED2Q15363 201 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 DPP9Q86TI2 863 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 SLC35F6Q8N357 371 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 NEK9Q8TD19 979 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 TEKT3Q9BXF9 490 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 SLC39A2Q9NP94 309 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 ARMCX3Q9UH62 379 aaPredicted RBP12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 MOSPD1Q9UJG1 213 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 JAK2O60674 1132 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 CUL4AQ13619 759 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 USP6NLQ92738 828 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 EXT2Q93063 718 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.42□□□□□ -0.428e-10■■■■■ 87.6
SPTBN1-202ENST00000356805 EYA2O00167 538 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 FAM160B1Q5W0V3 765 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 MCF2L2Q86YR7 1114 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 ATP6V0A1Q93050 837 aa12.42□□□□□ -0.42
SPTBN1-202ENST00000356805 GTPBP10A4D1E9 387 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 COBLO75128 1261 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 KRT10P13645 584 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 METTL22Q9BUU2 404 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 TBK1Q9UHD2 729 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 CCDC188H7C350 402 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 KCNJ6P48051 423 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 SCNN1DP51172 638 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 RASSF7Q02833 373 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 KIF19Q2TAC6 998 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 NBPF20Q3BBV1 942 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 PARP10Q53GL7 1025 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 YTHDC2Q9H6S0 1430 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 IPO5O00410 1097 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 PPP6R2O75170 966 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 ME3Q16798 604 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.425e-8■■■■■ 54.1
SPTBN1-202ENST00000356805 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 FLT4P35916 1363 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 KIAA0232Q92628 1395 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 TNRQ92752 1358 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 MMTAG2Q9BU76 263 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 RIMS2Q9UQ26 1411 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 MROH5Q6ZUA9 1318 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 MCF2LO15068 1137 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 MFSD14BQ5SR56 506 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 GCNAQ96QF7 691 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 TNNQ9UQP3 1299 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 RASGRF2O14827 1237 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 C1orf228Q6PIY5 440 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 ARHGAP27Q6ZUM4 889 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 LPIN2Q92539 896 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 TRIM11Q96F44 468 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 BCS1LQ9Y276 419 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 DUOX2Q9NRD8 1548 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 NPATQ14207 1427 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 SOS2Q07890 1332 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 SBNO1A3KN83 1393 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 TEX2Q8IWB9 1127 aa12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 MRPL40Q9NQ50 206 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-202ENST00000356805 WDR91A4D1P6 747 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 CAPRIN1Q14444 709 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 VSTM4Q8IW00 320 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 LZICQ8WZA0 190 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 UGGT2Q9NYU1 1516 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 SEMA3EO15041 775 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 FRA10AC1Q70Z53 315 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 FAM81BQ96LP2 452 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 VIPAS39Q9H9C1 493 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 PSD3Q9NYI0 1048 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 G3BP2Q9UN86 482 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 SLC8A2Q9UPR5 921 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 CFAP43Q8NDM7 1665 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 HLA-DPA1P20036 260 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 PPARAQ07869 468 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 SLC9A5Q14940 896 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 FAM98CQ17RN3 349 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 SRLQ86TD4 932 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 MAP7D3Q8IWC1 876 aa12.4□□□□□ -0.42
SPTBN1-202ENST00000356805 TEX9Q8N6V9 391 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms