RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TCP11X2Q5H9J9 407 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 CEP85Q6P2H3 762 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 CERS3Q8IU89 383 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 CLIC2O15247 247 aa18.64■□□□□ 0.58
COL27A1-201ENST00000356083 TBC1D22AQ8WUA7 517 aa18.64■□□□□ 0.58
COL27A1-201ENST00000356083 IFT43Q96FT9 208 aa18.64■□□□□ 0.58
COL27A1-201ENST00000356083 ADAM9Q13443 819 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 MTERF2Q49AM1 385 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.64■□□□□ 0.571e-7■■■■■ 28.2
COL27A1-201ENST00000356083 MSH2P43246 934 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 ZNF790Q6PG37 636 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 PBXIP1Q96AQ6 731 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 MAP3K5Q99683 1374 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 DISP3Q9P2K9 1392 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 SNX2O60749 519 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 NNMTP40261 264 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 RNF207Q6ZRF8 634 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 MRPL50Q8N5N7 158 aaKnown RBP18.64■□□□□ 0.57
COL27A1-201ENST00000356083 CCDC90BQ9GZT6 254 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 UBXN8O00124 270 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 RAD17O75943 681 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 CXCR5P32302 372 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 SLC7A3Q8WY07 619 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 ZNF263O14978 683 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 JAK2O60674 1132 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 CHEK2O96017 543 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 PPARGP37231 505 aaPredicted RBP18.64■□□□□ 0.57
COL27A1-201ENST00000356083 EHHADHQ08426 723 aa18.64■□□□□ 0.57
COL27A1-201ENST00000356083 TRIP13Q15645 432 aaPredicted RBP18.64■□□□□ 0.57
COL27A1-201ENST00000356083 ATP8B3O60423 1300 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 KLRF2D3W0D1 207 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 SERTAD1Q9UHV2 236 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 ZNF507Q8TCN5 953 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 CFAP69A5D8W1 941 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 WBP4O75554 376 aaKnown RBP18.63■□□□□ 0.57
COL27A1-201ENST00000356083 EXOC3L4Q17RC7 722 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 EXOC8Q8IYI6 725 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 ATP8A2Q9NTI2 1148 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 HSPA6P17066 643 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 KRT26Q7Z3Y9 468 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 BBOF1Q8ND07 529 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 SLC10A4Q96EP9 437 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 FSD1LQ9BXM9 530 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 C6orf203Q9P0P8 240 aaPredicted RBP18.63■□□□□ 0.57
COL27A1-201ENST00000356083 PSDA5PKW4 1024 aaPredicted RBP18.63■□□□□ 0.57
COL27A1-201ENST00000356083 E5RI56 91 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 EFCAB14O75071 495 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 SERPINI2O75830 405 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 MYO1EQ12965 1108 aa18.63■□□□□ 0.57
COL27A1-201ENST00000356083 LBRQ14739 615 aaKnown RBP18.63■□□□□ 0.57
COL27A1-201ENST00000356083 ARIH2O95376 493 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 BRD2P25440 801 aaKnown RBP18.62■□□□□ 0.57
COL27A1-201ENST00000356083 YAF2Q8IY57 180 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 LARSQ9P2J5 1176 aaKnown RBP18.62■□□□□ 0.57
COL27A1-201ENST00000356083 ZNF215Q9UL58 517 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-201ENST00000356083 EYA2O00167 538 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 MEIS1O00470 390 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 TRIM37O94972 964 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 PLBD2Q8NHP8 589 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 SLC26A7Q8TE54 656 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 SMAD5Q99717 465 aaKnown RBP18.62■□□□□ 0.57
COL27A1-201ENST00000356083 ZWILCHQ9H900 591 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 DYRK4Q9NR20 520 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 GUCY2DQ02846 1103 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 ATL3Q6DD88 541 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 TRIM58Q8NG06 486 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 VMP1Q96GC9 406 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 DDX53Q86TM3 631 aaKnown RBP18.62■□□□□ 0.57
COL27A1-201ENST00000356083 PASKQ96RG2 1323 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 NFKBIAP25963 317 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 ANKRD13CQ8N6S4 541 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 DENND3A2RUS2 1198 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 KITP10721 976 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 ANGPT1Q15389 498 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 RRM2BQ7LG56 351 aa18.62■□□□□ 0.57
COL27A1-201ENST00000356083 THOC1Q96FV9 657 aaKnown RBP18.62■□□□□ 0.57
COL27A1-201ENST00000356083 SGO2Q562F6 1265 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 NACC1Q96RE7 527 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 SMYD3Q9H7B4 428 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 A6NNZ2 444 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 HSPA8P11142 646 aaKnown RBP18.61■□□□□ 0.57
COL27A1-201ENST00000356083 TUBB8Q3ZCM7 444 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 CEP170P1Q96L14 293 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 ARL4DP49703 201 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 DNAJC17Q9NVM6 304 aaKnown RBP18.61■□□□□ 0.57
COL27A1-201ENST00000356083 FARP1Q9Y4F1 1045 aaPredicted RBP18.61■□□□□ 0.57
COL27A1-201ENST00000356083 PPP1R14AQ96A00 147 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 CACNA2D2Q9NY47 1150 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 STRIP2Q9ULQ0 834 aa18.61■□□□□ 0.57
COL27A1-201ENST00000356083 PRPSAP2O60256 369 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 MOCS3O95396 460 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 IL9RQ01113 521 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 WASHC5Q12768 1159 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 NBPF20Q3BBV1 942 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 NBPF10Q6P3W6 841 aaKnown RBP18.6■□□□□ 0.57
COL27A1-201ENST00000356083 SBNO1A3KN83 1393 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 SOS1Q07889 1333 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-201ENST00000356083 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
COL27A1-201ENST00000356083 DDIT3P35638 169 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms