RNA–Protein interactions for RNA: ENST00000348549.9

CASP9-202, Transcript of caspase 9, humanhuman

TSL 1 (best) BASIC

Gene CASP9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-202ENST00000348549 NT5C3AQ9H0P0 336 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 A1CFQ9NQ94 594 aaKnown RBP27.38■■□□□ 1.97
CASP9-202ENST00000348549 CYP39A1Q9NYL5 469 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 PSMD10O75832 226 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 CCDC173Q0VFZ6 552 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 CUL4BQ13620 913 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 HAUS3Q68CZ6 603 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 ISM2Q6H9L7 571 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 DHX40Q8IX18 779 aaKnown RBP27.38■■□□□ 1.97
CASP9-202ENST00000348549 PPP1R9BQ96SB3 815 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 SPATC1LQ9H0A9 340 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 BLOC1S4Q9NUP1 217 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 DACH1Q9UI36 760 aa27.38■■□□□ 1.97
CASP9-202ENST00000348549 LCTP09848 1927 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 CETPP11597 493 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 ITGB5P18084 799 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 CASP1P29466 404 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 CCT6AP40227 531 aaKnown RBP27.37■■□□□ 1.97
CASP9-202ENST00000348549 MRPS9P82933 396 aaKnown RBP27.37■■□□□ 1.97
CASP9-202ENST00000348549 AMPD3Q01432 767 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 CT47A1Q5JQC4 288 aaPredicted RBP27.37■■□□□ 1.97
CASP9-202ENST00000348549 ARHGEF16Q5VV41 709 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 CHADLQ6NUI6 762 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 JADE2Q9NQC1 790 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 RMND1Q9NWS8 449 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 SLC45A1Q9Y2W3 748 aa27.37■■□□□ 1.97
CASP9-202ENST00000348549 CNMDO75829 334 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 ITGBL1O95965 494 aaPredicted RBP27.36■■□□□ 1.97
CASP9-202ENST00000348549 EIF2AK2P19525 551 aaKnown RBP27.36■■□□□ 1.97
CASP9-202ENST00000348549 COPB2P35606 906 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 GTF2A2P52657 109 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 PPP2R5CQ13362 524 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 LRCH2Q5VUJ6 765 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 UIMC1Q96RL1 719 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 RIT2Q99578 217 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 C7orf25Q9BPX7 421 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 BLZF1Q9H2G9 400 aa27.36■■□□□ 1.97
CASP9-202ENST00000348549 BECN2A8MW95 431 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 GOLGA6L19H0YKK7 550 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 ARP10275 920 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.35■■□□□ 1.97
CASP9-202ENST00000348549 OTOP1Q7RTM1 612 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 NSUN6Q8TEA1 469 aaKnown RBP27.35■■□□□ 1.97
CASP9-202ENST00000348549 GTF3C2Q8WUA4 911 aaPredicted RBP27.35■■□□□ 1.97
CASP9-202ENST00000348549 RAD54LQ92698 747 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 MS4A4AQ96JQ5 239 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 ZNF577Q9BSK1 485 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 WDR11Q9BZH6 1224 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 PNMA3Q9UL41 463 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 PFASO15067 1338 aa27.35■■□□□ 1.97
CASP9-202ENST00000348549 IKBKBO14920 756 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 RPN1P04843 607 aaKnown RBP27.34■■□□□ 1.97
CASP9-202ENST00000348549 NCAPH2Q6IBW4 605 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 SV2BQ7L1I2 683 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 KCTD17Q8N5Z5 321 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 LARP4BQ92615 738 aaKnown RBP27.34■■□□□ 1.97
CASP9-202ENST00000348549 PDLIM2Q96JY6 352 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 LRRC27Q9C0I9 530 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 SMTNL1A8MU46 457 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 GAS7O60861 476 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 SLC25A27O95847 323 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 ZBTB48P10074 688 aaPredicted RBP27.34■■□□□ 1.97
CASP9-202ENST00000348549 RPA1P27694 616 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 CCND2P30279 289 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 KCNB1Q14721 858 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 ECM1Q16610 540 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 VSIG10LQ86VR7 867 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 AOPEPQ8N6M6 819 aa27.34■■□□□ 1.97
CASP9-202ENST00000348549 IPO5O00410 1097 aaKnown RBP27.33■■□□□ 1.97
CASP9-202ENST00000348549 CNNM4Q6P4Q7 775 aa27.33■■□□□ 1.97
CASP9-202ENST00000348549 B3GNT9Q6UX72 402 aa27.33■■□□□ 1.97
CASP9-202ENST00000348549 POLR3CQ9BUI4 534 aaPredicted RBP27.33■■□□□ 1.97
CASP9-202ENST00000348549 TRIM9Q9C026 710 aa27.33■■□□□ 1.97
CASP9-202ENST00000348549 KCNH7Q9NS40 1196 aa27.33■■□□□ 1.97
CASP9-202ENST00000348549 RBPJLQ9UBG7 517 aa27.33■■□□□ 1.97
CASP9-202ENST00000348549 SPRYD7Q5W111 196 aa27.32■■□□□ 1.96
CASP9-202ENST00000348549 CST9Q5W186 159 aa27.32■■□□□ 1.96
CASP9-202ENST00000348549 ZNF526Q8TF50 670 aaPredicted RBP27.32■■□□□ 1.96
CASP9-202ENST00000348549 PURBQ96QR8 312 aaKnown RBP27.32■■□□□ 1.96
CASP9-202ENST00000348549 PAGR1Q9BTK6 254 aa27.32■■□□□ 1.96
CASP9-202ENST00000348549 TEKT3Q9BXF9 490 aa27.32■■□□□ 1.96
CASP9-202ENST00000348549 MOV10L1Q9BXT6 1211 aaKnown RBP27.32■■□□□ 1.96
CASP9-202ENST00000348549 AGO4Q9HCK5 861 aaKnown RBP27.32■■□□□ 1.96
CASP9-202ENST00000348549 MED24O75448 989 aa27.31■■□□□ 1.96
CASP9-202ENST00000348549 NR3C2P08235 984 aa27.31■■□□□ 1.96
CASP9-202ENST00000348549 KCNK18Q7Z418 384 aa27.31■■□□□ 1.96
CASP9-202ENST00000348549 DNERQ8NFT8 737 aa27.31■■□□□ 1.96
CASP9-202ENST00000348549 ZFP91Q96JP5 570 aaPredicted RBP27.31■■□□□ 1.96
CASP9-202ENST00000348549 KLRC4O43908 158 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 STAM2O75886 525 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 SPATA31C1P0DKV0 1188 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 MYCLP12524 364 aaPredicted RBP27.3■■□□□ 1.96
CASP9-202ENST00000348549 MTMR1Q13613 665 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 MCM6Q14566 821 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 ANKRD23Q86SG2 305 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 CATSPER3Q86XQ3 398 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 ANKRD35Q8N283 1001 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 IWS1Q96ST2 819 aa27.3■■□□□ 1.96
CASP9-202ENST00000348549 GTPBP4Q9BZE4 634 aaKnown RBP27.3■■□□□ 1.96
CASP9-202ENST00000348549 KIAA1024Q9UPX6 916 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms