RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 LUC7LQ9NQ29 371 aaKnown RBP17.23■□□□□ 0.35
LRP8-202ENST00000347547 CNOT8Q9UFF9 292 aaKnown RBP17.23■□□□□ 0.35
LRP8-202ENST00000347547 KCNG1Q9UIX4 513 aa17.23■□□□□ 0.35
LRP8-202ENST00000347547 SLC12A4Q9UP95 1085 aa17.23■□□□□ 0.35
LRP8-202ENST00000347547 MYH10P35580 1976 aa17.23■□□□□ 0.35
LRP8-202ENST00000347547 BUB1O43683 1085 aa17.23■□□□□ 0.35
LRP8-202ENST00000347547 TRIM37O94972 964 aa17.23■□□□□ 0.35
LRP8-202ENST00000347547 IBSPP21815 317 aaPredicted RBP17.23■□□□□ 0.35
LRP8-202ENST00000347547 TMOD1P28289 359 aa17.23■□□□□ 0.35
LRP8-202ENST00000347547 CTNNA1P35221 906 aaKnown RBP17.23■□□□□ 0.35
LRP8-202ENST00000347547 CCNHP51946 323 aaPredicted RBP17.23■□□□□ 0.35
LRP8-202ENST00000347547 HGSNATQ68CP4 663 aa17.23■□□□□ 0.35
LRP8-202ENST00000347547 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
LRP8-202ENST00000347547 NDST4Q9H3R1 872 aa17.23■□□□□ 0.35
LRP8-202ENST00000347547 TNS2Q63HR2 1409 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 CFAP73A6NFT4 308 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 PALMO75781 387 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 ITGA6P23229 1130 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 NLRP5P59047 1200 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 ACCSLQ4AC99 568 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 RRAGAQ7L523 313 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 ANKRD13CQ8N6S4 541 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 SYN2Q92777 582 aaPredicted RBP17.22■□□□□ 0.35
LRP8-202ENST00000347547 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.355e-8■■■■□ 19.5
LRP8-202ENST00000347547 C15orf41Q9Y2V0 281 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 RREB1Q92766 1687 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 F8W031 263 aaPredicted RBP17.22■□□□□ 0.35
LRP8-202ENST00000347547 PPP1R12BO60237 982 aaPredicted RBP17.22■□□□□ 0.35
LRP8-202ENST00000347547 ECM2O94769 699 aaPredicted RBP17.22■□□□□ 0.35
LRP8-202ENST00000347547 SCG2P13521 617 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 FGFR2P21802 821 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 GFPT1Q06210 699 aaPredicted RBP17.22■□□□□ 0.35
LRP8-202ENST00000347547 ITIH4Q14624 930 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 MAN2A1Q16706 1144 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 CDCA2Q69YH5 1023 aaPredicted RBP17.22■□□□□ 0.35
LRP8-202ENST00000347547 DTHD1Q6ZMT9 781 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 CPLX4Q7Z7G2 160 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 CCDC197Q8NCU1 140 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 ZNF483Q8TF39 744 aaPredicted RBP17.22■□□□□ 0.35
LRP8-202ENST00000347547 CHMP6Q96FZ7 201 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 FAM89AQ96GI7 184 aa17.22■□□□□ 0.35
LRP8-202ENST00000347547 FAM207AQ9NSI2 230 aaPredicted RBP17.22■□□□□ 0.35
LRP8-202ENST00000347547 BUB1BO60566 1050 aaPredicted RBP17.21■□□□□ 0.35
LRP8-202ENST00000347547 CALML3P27482 149 aa17.21■□□□□ 0.35
LRP8-202ENST00000347547 HLTFQ14527 1009 aaKnown RBP eCLIP17.21■□□□□ 0.35
LRP8-202ENST00000347547 ERMARDQ5T6L9 678 aa17.21■□□□□ 0.35
LRP8-202ENST00000347547 IFIT1BQ5T764 474 aaKnown RBP17.21■□□□□ 0.35
LRP8-202ENST00000347547 SCFD2Q8WU76 684 aa17.21■□□□□ 0.35
LRP8-202ENST00000347547 NSMCE1Q8WV22 266 aa17.21■□□□□ 0.35
LRP8-202ENST00000347547 C7orf25Q9BPX7 421 aa17.21■□□□□ 0.35
LRP8-202ENST00000347547 NUCKS1Q9H1E3 243 aaKnown RBP17.21■□□□□ 0.35
LRP8-202ENST00000347547 DLEC1Q9Y238 1755 aa17.21■□□□□ 0.35
LRP8-202ENST00000347547 A0A0G2JS52 829 aa17.21■□□□□ 0.34
LRP8-202ENST00000347547 FRMD3A2A2Y4 597 aa17.21■□□□□ 0.34
LRP8-202ENST00000347547 RPSAP08865 295 aaKnown RBP17.21■□□□□ 0.34
LRP8-202ENST00000347547 UBA7P41226 1012 aa17.21■□□□□ 0.34
LRP8-202ENST00000347547 EVA1CP58658 441 aa17.21■□□□□ 0.34
LRP8-202ENST00000347547 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.34
LRP8-202ENST00000347547 ODF2Q5BJF6 829 aa17.21■□□□□ 0.34
LRP8-202ENST00000347547 CENPPQ6IPU0 288 aa17.21■□□□□ 0.34
LRP8-202ENST00000347547 HIBCHQ6NVY1 386 aaPredicted RBP17.21■□□□□ 0.34
LRP8-202ENST00000347547 CALR3Q96L12 384 aaKnown RBP17.21■□□□□ 0.34
LRP8-202ENST00000347547 FAM129AQ9BZQ8 928 aa17.21■□□□□ 0.34
LRP8-202ENST00000347547 BCCIPQ9P287 314 aaKnown RBP eCLIP17.21■□□□□ 0.34
LRP8-202ENST00000347547 KLHL33A6NCF5 533 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 ASAP2O43150 1006 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 ALADP13716 330 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 PDE4DQ08499 809 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 STK4Q13043 487 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 PFKFB3Q16875 520 aaPredicted RBP17.2■□□□□ 0.34
LRP8-202ENST00000347547 SPDYCQ5MJ68 293 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 OR2W6PQ8NHA6 318 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 TLCD1Q96CP7 247 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 STAMBPL1Q96FJ0 436 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 XPO6Q96QU8 1125 aaKnown RBP17.2■□□□□ 0.34
LRP8-202ENST00000347547 TRIM9Q9C026 710 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 GREM2Q9H772 168 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 MMRN2Q9H8L6 949 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 HOMER3Q9NSC5 361 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 DUOX1Q9NRD9 1551 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 PHF20L1A8MW92 1017 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 LIN7AO14910 233 aaPredicted RBP17.2■□□□□ 0.34
LRP8-202ENST00000347547 NKRFO15226 690 aaKnown RBP eCLIP17.2■□□□□ 0.34
LRP8-202ENST00000347547 SARNPP82979 210 aaKnown RBP17.2■□□□□ 0.34
LRP8-202ENST00000347547 PPP1R7Q15435 360 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 STAG2Q8N3U4 1231 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 CCDC63Q8NA47 563 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 BAIAP2L1Q9UHR4 511 aa17.2■□□□□ 0.34
LRP8-202ENST00000347547 NOVA2Q9UNW9 492 aaKnown RBP17.2■□□□□ 0.34
LRP8-202ENST00000347547 LRP5O75197 1615 aa17.19■□□□□ 0.34
LRP8-202ENST00000347547 ANKRD33BA6NCL7 494 aa17.19■□□□□ 0.34
LRP8-202ENST00000347547 LAD1O00515 517 aa17.19■□□□□ 0.34
LRP8-202ENST00000347547 FTCDO95954 541 aa17.19■□□□□ 0.34
LRP8-202ENST00000347547 ZNF268Q14587 947 aaPredicted RBP17.19■□□□□ 0.34
LRP8-202ENST00000347547 NBPF20Q3BBV1 942 aa17.19■□□□□ 0.34
LRP8-202ENST00000347547 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
LRP8-202ENST00000347547 ANKS4BQ8N8V4 417 aa17.19■□□□□ 0.34
LRP8-202ENST00000347547 LRRC15Q8TF66 581 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms