RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CAPN11Q9UMQ6 739 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 GOLGA6L10A6NI86 522 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 PALMO75781 387 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 SSR1P43307 286 aaKnown RBP13.84□□□□□ -0.19
LMX1A-202ENST00000342310 GRAPQ13588 217 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 GJB7Q6PEY0 223 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 DDX42Q86XP3 938 aaKnown RBP eCLIP13.84□□□□□ -0.19
LMX1A-202ENST00000342310 TICAM2Q86XR7 235 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 GRAPLQ8TC17 118 aaPredicted RBP13.84□□□□□ -0.19
LMX1A-202ENST00000342310 TNFRSF25Q93038 417 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 FGFBP2Q9BYJ0 223 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 ARHGAP20Q9P2F6 1191 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 SPATA20Q8TB22 786 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 CUL5Q93034 780 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 BAZ2AQ9UIF9 1905 aaKnown RBP13.83□□□□□ -0.2
LMX1A-202ENST00000342310 KCPQ6ZWJ8 1503 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 NDUFAB1O14561 156 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 HEXIM1O94992 359 aaKnown RBP13.83□□□□□ -0.2
LMX1A-202ENST00000342310 COPB2P35606 906 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 GJC1P36383 396 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 IFFO1Q0D2I5 559 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 CTTNQ14247 550 aaKnown RBP13.83□□□□□ -0.2
LMX1A-202ENST00000342310 CCDC25Q86WR0 208 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 CCDC65Q8IXS2 484 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 TRIM58Q8NG06 486 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 U2AF1L4Q8WU68 220 aaKnown RBP13.83□□□□□ -0.2
LMX1A-202ENST00000342310 BHMT2Q9H2M3 363 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 THAP9Q9H5L6 903 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 LUC7LQ9NQ29 371 aaKnown RBP13.83□□□□□ -0.2
LMX1A-202ENST00000342310 MYO5AQ9Y4I1 1855 aaKnown RBP13.83□□□□□ -0.2
LMX1A-202ENST00000342310 CETN3O15182 167 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 KRT13P13646 458 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 USP14P54578 494 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 MYCT1Q8N699 235 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 CEP89Q96ST8 783 aa13.83□□□□□ -0.2
LMX1A-202ENST00000342310 SHTN1A0MZ66 631 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 SRGNP10124 158 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 TRADDQ15628 312 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 OR2W6PQ8NHA6 318 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 NUP58Q9BVL2 599 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 RBM12Q9NTZ6 932 aaKnown RBP13.82□□□□□ -0.2
LMX1A-202ENST00000342310 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 PDHBP11177 359 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 SEPT2Q15019 361 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 MAN2A1Q16706 1144 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 CYP2W1Q8TAV3 490 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 PCIF1Q9H4Z3 704 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 POLLQ9UGP5 575 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 PLA2G4BP0C869 781 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 SLC9A1P19634 815 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 COASYQ13057 564 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 GRB10Q13322 594 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 ASIC2Q16515 512 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 PRR5LQ6MZQ0 368 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 ZFPM1Q8IX07 1006 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 SPATA4Q8NEY3 305 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 OSBPL9Q96SU4 736 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 EMILIN3Q9NT22 766 aa13.82□□□□□ -0.2
LMX1A-202ENST00000342310 KLRC4O43908 158 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 SLF2Q8IX21 1173 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 KBTBD4Q9NVX7 518 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
LMX1A-202ENST00000342310 COL1A1P02452 1464 aaPredicted RBP13.81□□□□□ -0.2
LMX1A-202ENST00000342310 RSPH10B2B2RC85 870 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 ZBTB39O15060 712 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 BUB1BO60566 1050 aaPredicted RBP13.81□□□□□ -0.2
LMX1A-202ENST00000342310 GFPT2O94808 682 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 RSPH10BP0C881 870 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 ADCY1Q08828 1119 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 SLFN13Q68D06 897 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 CDCA7Q9BWT1 371 aaPredicted RBP13.81□□□□□ -0.2
LMX1A-202ENST00000342310 DAGLAQ9Y4D2 1042 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
LMX1A-202ENST00000342310 KIAA0754O94854 1291 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 PLCG2P16885 1265 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 CARSP49589 748 aaKnown RBP13.81□□□□□ -0.2
LMX1A-202ENST00000342310 FKBP3Q00688 224 aaKnown RBP13.81□□□□□ -0.2
LMX1A-202ENST00000342310 MTMR8Q96EF0 704 aa13.81□□□□□ -0.2
LMX1A-202ENST00000342310 ZNF263O14978 683 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 SEMA3EO15041 775 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 FAM13AO94988 1023 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 PBX1P40424 430 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 PSMC6P62333 389 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 DAAM2Q86T65 1068 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 EXOC4Q96A65 974 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 RBM17Q96I25 401 aaKnown RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 DDX4Q9NQI0 724 aaKnown RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 COL4A3BPQ9Y5P4 624 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms