RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 NAP1L3Q99457 506 aaPredicted RBP13□□□□□ -0.33
TPX2-202ENST00000340513 CCSER1Q9C0I3 900 aa13□□□□□ -0.33
TPX2-202ENST00000340513 TRIM17Q9Y577 477 aa13□□□□□ -0.33
TPX2-202ENST00000340513 MAST1Q9Y2H9 1570 aa13□□□□□ -0.33
TPX2-202ENST00000340513 LDHBP07195 334 aaKnown RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 S100A1P23297 94 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 CD97P48960 835 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 RBL2Q08999 1139 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 ZBTB17Q13105 803 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 CCDC153Q494R4 210 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 ZC2HC1CQ53FD0 456 aaPredicted RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 AGAP9Q5VTM2 703 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 IRGCQ6NXR0 463 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 PPP2R3CQ969Q6 453 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 HSPBAP1Q96EW2 488 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 LRRC2Q9BYS8 371 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 METTL5Q9NRN9 209 aaKnown RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 DUOX2Q9NRD8 1548 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 DKC1O60832 514 aaKnown RBP eCLIP12.99□□□□□ -0.33
TPX2-202ENST00000340513 ASLP04424 464 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 EPB41P11171 864 aaKnown RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 GEMIN4P57678 1058 aaKnown RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 PTH1RQ03431 593 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 C8orf74Q6P047 294 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 MACROD2A1Z1Q3 448 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 EEF2P13639 858 aaKnown RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 TKTP29401 623 aaKnown RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 HPCAP84074 193 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 SHROOM1Q2M3G4 852 aaPredicted RBP12.99□□□□□ -0.33
TPX2-202ENST00000340513 TMTC4Q5T4D3 741 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 SYDE2Q5VT97 1194 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 GDAP1Q8TB36 358 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 CHMP6Q96FZ7 201 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 SPATA16Q9BXB7 569 aa12.99□□□□□ -0.33
TPX2-202ENST00000340513 F6X3S4 739 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 DNAJC6O75061 913 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 MSL3P1P0C860 447 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 CETN2P41208 172 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 ATP8B2P98198 1209 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 CAMK2BQ13554 666 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 EMBQ6PCB8 327 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 SESTD1Q86VW0 696 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 BPHLQ86WA6 291 aaPredicted RBP12.98□□□□□ -0.33
TPX2-202ENST00000340513 TREML1Q86YW5 311 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 C8orf58Q8NAV2 365 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 C2orf49Q9BVC5 232 aaPredicted RBP12.98□□□□□ -0.33
TPX2-202ENST00000340513 CNGB3Q9NQW8 809 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 HMOX1P09601 288 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 RXRGP48443 463 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 RETREG2Q8NC44 543 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 CCDC42Q96M95 316 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
TPX2-202ENST00000340513 TPK1Q9H3S4 243 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 ETNK1Q9HBU6 452 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 PALMDQ9NP74 551 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
TPX2-202ENST00000340513 COMMD3-BMI1R4GMX3 469 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 CXCR5P32302 372 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
TPX2-202ENST00000340513 PTDSS1P48651 473 aaKnown RBP12.98□□□□□ -0.33
TPX2-202ENST00000340513 WASHC5Q12768 1159 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 FAM192AQ9GZU8 254 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 TRPC7Q9HCX4 862 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
TPX2-202ENST00000340513 WDR46O15213 610 aaKnown RBP12.97□□□□□ -0.33
TPX2-202ENST00000340513 KIF5AQ12840 1032 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 ARHGEF6Q15052 776 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 PRR23CQ6ZRP0 262 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 NOP9Q86U38 636 aaKnown RBP12.97□□□□□ -0.33
TPX2-202ENST00000340513 SMARCAL1Q9NZC9 954 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 PDP2Q9P2J9 529 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 PCDHA7Q9UN72 937 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 AGLP35573 1532 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 TLDC2A0PJX2 215 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 PCP4L1A6NKN8 68 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 MZF1P28698 734 aaPredicted RBP12.97□□□□□ -0.33
TPX2-202ENST00000340513 EIF2B2P49770 351 aaKnown RBP12.97□□□□□ -0.33
TPX2-202ENST00000340513 USH1GQ495M9 461 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 ADALQ6DHV7 355 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 OTUD6AQ7L8S5 288 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
TPX2-202ENST00000340513 SELENONQ9NZV5 590 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 LARSQ9P2J5 1176 aaKnown RBP12.97□□□□□ -0.33
TPX2-202ENST00000340513 LRRC42Q9Y546 428 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 CEP152O94986 1710 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 MYPNQ86TC9 1320 aa12.97□□□□□ -0.33
TPX2-202ENST00000340513 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 CPLX1O14810 134 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 ZPR1O75312 459 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 CALB2P22676 271 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 CASP14P31944 242 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 LSAMPQ13449 338 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 SYT2Q8N9I0 419 aaPredicted RBP12.96□□□□□ -0.33
TPX2-202ENST00000340513 ANKK1Q8NFD2 765 aa12.96□□□□□ -0.33
TPX2-202ENST00000340513 UBLCP1Q8WVY7 318 aaPredicted RBP12.96□□□□□ -0.33
TPX2-202ENST00000340513 ANKRD27Q96NW4 1050 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms