RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 KIAA1328Q86T90 577 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 LDHDQ86WU2 507 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 BANK1Q8NDB2 785 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 CHP1Q99653 195 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 TSG101Q99816 390 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 HERC5Q9UII4 1024 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 LUC7L2Q9Y383 392 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 NFIBO00712 420 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 PRPF6O94906 941 aaKnown RBP11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 CACNA2D4Q7Z3S7 1137 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 ERMNQ8TAM6 284 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 CHURC1Q8WUH1 139 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 MTMR9Q96QG7 549 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 MRPL44Q9H9J2 332 aaKnown RBP11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 MYH8P13535 1937 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 IPO7O95373 1038 aaKnown RBP11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 GCNT3O95395 438 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 CYP27A1Q02318 531 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 COASYQ13057 564 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 PTPROQ16827 1216 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 PDCL2Q8N4E4 241 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 WDR24Q96S15 920 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 CARD6Q9BX69 1037 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 TRIM10Q9UDY6 481 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 TTC26A0AVF1 554 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 H7C1D1 291 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 NFKBIEO00221 500 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 MFAP3LO75121 409 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 CCDC175P0C221 793 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 CAP2P40123 477 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 HMGCS2P54868 508 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 ZNF713Q8N859 430 aaPredicted RBP11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 HINFPQ9BQA5 517 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 DNM3Q9UQ16 869 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 MYO3BQ8WXR4 1341 aa11.31□□□□□ -0.6
RBFOX1-202ENST00000340209 EDIL3O43854 480 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 CCNE1P24864 410 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 CDKAL1Q5VV42 579 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 GIMAP8Q8ND71 665 aaPredicted RBP11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 PSMB7Q99436 277 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 VCPKMTQ9H867 229 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 ZNHIT6Q9NWK9 470 aaKnown RBP11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 BICDL2A1A5D9 508 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 MACROD2A1Z1Q3 448 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 MSH4O15457 936 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 RHOBTB3O94955 611 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 ASNSP08243 561 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 CBX1P83916 185 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 TNIP1Q15025 636 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 ERCC6LQ2NKX8 1250 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 MYOCDQ8IZQ8 938 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 DYDC2Q96IM9 177 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 SEMA6BQ9H3T3 888 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 ZHX2Q9Y6X8 837 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 ABL1P00519 1130 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 CATSPER3Q86XQ3 398 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 CNGA4Q8IV77 575 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 ZNF577Q9BSK1 485 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 PICK1Q9NRD5 415 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 PLIN4Q96Q06 1357 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 EML1O00423 815 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 HAUS3Q68CZ6 603 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 SFR1Q86XK3 245 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 MYCT1Q8N699 235 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 GGA3Q9NZ52 723 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 PCDHB13Q9Y5F0 798 aa11.3□□□□□ -0.6
RBFOX1-202ENST00000340209 FAM13AO94988 1023 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 PSMD1Q99460 953 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 PAXBP1Q9Y5B6 917 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 ENC1O14682 589 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 ARP10275 920 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 PPP1R18Q6NYC8 613 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 UNC13DQ70J99 1090 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 IRF2BP1Q8IU81 584 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 CAPZA3Q96KX2 299 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 DUSP9Q99956 384 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 ZNF408Q9H9D4 720 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 TMX2Q9Y320 296 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 KIF5CO60282 957 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 ETF1P62495 437 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 UTP14CQ5TAP6 766 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 TTI2Q6NXR4 508 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 RRAGAQ7L523 313 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms