RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 NR3C2P08235 984 aa13.4□□□□□ -0.26
CSMD2-202ENST00000338325 HOXD8P13378 290 aaPredicted RBP13.4□□□□□ -0.26
CSMD2-202ENST00000338325 MBTPS1Q14703 1052 aa13.4□□□□□ -0.26
CSMD2-202ENST00000338325 ANKS1AQ92625 1134 aa13.4□□□□□ -0.26
CSMD2-202ENST00000338325 RILPL2Q969X0 211 aa13.4□□□□□ -0.26
CSMD2-202ENST00000338325 JMJD4Q9H9V9 463 aa13.4□□□□□ -0.26
CSMD2-202ENST00000338325 CD320Q9NPF0 282 aa13.4□□□□□ -0.26
CSMD2-202ENST00000338325 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
CSMD2-202ENST00000338325 HSD17B4P51659 736 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 ZNF200P98182 395 aaPredicted RBP13.39□□□□□ -0.27
CSMD2-202ENST00000338325 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 ENAHQ8N8S7 591 aaPredicted RBP13.39□□□□□ -0.27
CSMD2-202ENST00000338325 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
CSMD2-202ENST00000338325 VAT1LQ9HCJ6 419 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 INSL6Q9Y581 213 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 COL4A6Q14031 1691 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 B4E1Z4 1266 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 AMHP03971 560 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 SDSP20132 328 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 KCNA5P22460 613 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 GHRHRQ02643 423 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
CSMD2-202ENST00000338325 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
CSMD2-202ENST00000338325 HIC1Q14526 733 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 MYSM1Q5VVJ2 828 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 KCNV1Q6PIU1 500 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSMD2-202ENST00000338325 FAM178BQ8IXR5 827 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 SPATA33Q96N06 139 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 C17orf80Q9BSJ5 609 aa13.39□□□□□ -0.27
CSMD2-202ENST00000338325 DOCK5Q9H7D0 1870 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 ATG2AQ2TAZ0 1938 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 OPLAHO14841 1288 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 PPFIA4O75335 1185 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 RGS20O76081 388 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 MYCLP12524 364 aaPredicted RBP13.38□□□□□ -0.27
CSMD2-202ENST00000338325 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
CSMD2-202ENST00000338325 HTRA4P83105 476 aaPredicted RBP13.38□□□□□ -0.27
CSMD2-202ENST00000338325 CELF3Q5SZQ8 465 aaKnown RBP13.38□□□□□ -0.27
CSMD2-202ENST00000338325 SERINC5Q86VE9 423 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 MYOCDQ8IZQ8 938 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 DBF4BQ8NFT6 615 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
CSMD2-202ENST00000338325 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
CSMD2-202ENST00000338325 PDCD2LQ9BRP1 358 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 AMNQ9BXJ7 453 aa13.38□□□□□ -0.27
CSMD2-202ENST00000338325 MAP3K20Q9NYL2 800 aaKnown RBP13.38□□□□□ -0.27
CSMD2-202ENST00000338325 RSPH10B2B2RC85 870 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 SORBS3O60504 671 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 GGPS1O95749 300 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 RSPH10BP0C881 870 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 THPOP40225 353 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 HSDL1Q3SXM5 330 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 PLEKHG4Q58EX7 1191 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 STOX1Q6ZVD7 989 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 GJD3Q8N144 294 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 MRPL38Q96DV4 380 aaKnown RBP13.37□□□□□ -0.27
CSMD2-202ENST00000338325 SAMD11Q96NU1 681 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 ZSWIM5Q9P217 1185 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 CTNNA3Q9UI47 895 aa13.37□□□□□ -0.27
CSMD2-202ENST00000338325 C17orf102A2RUQ5 167 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 PRR33A8MZF0 331 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 IL9P15248 144 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 UBA1P22314 1058 aaKnown RBP13.36□□□□□ -0.27
CSMD2-202ENST00000338325 SSTR3P32745 418 aaPredicted RBP13.36□□□□□ -0.27
CSMD2-202ENST00000338325 PGM5Q15124 567 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 PTPROQ16827 1216 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 TIGD5Q53EQ6 642 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 PTCRAQ6ISU1 281 aaPredicted RBP13.36□□□□□ -0.27
CSMD2-202ENST00000338325 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 SAMD3Q8N6K7 520 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 C16orf70Q9BSU1 422 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 KRT23Q9C075 422 aa13.36□□□□□ -0.27
CSMD2-202ENST00000338325 ZBTB5O15062 677 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 PPP1R11O60927 126 aaPredicted RBP13.35□□□□□ -0.27
CSMD2-202ENST00000338325 TGFB3P10600 412 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 CCND2P30279 289 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
CSMD2-202ENST00000338325 HOXC8P31273 242 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 SP2Q02086 613 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 IMMTQ16891 758 aaKnown RBP13.35□□□□□ -0.27
CSMD2-202ENST00000338325 PUS10Q3MIT2 529 aaKnown RBP13.35□□□□□ -0.27
CSMD2-202ENST00000338325 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
CSMD2-202ENST00000338325 CWC27Q6UX04 472 aaKnown RBP13.35□□□□□ -0.27
CSMD2-202ENST00000338325 VSIG10LQ86VR7 867 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 IL31RAQ8NI17 732 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 SEPT8Q92599 483 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 ATP6V0A1Q93050 837 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 MTMR8Q96EF0 704 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 DSCC1Q9BVC3 393 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 MLXIPQ9HAP2 919 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 PCDHA1Q9Y5I3 950 aa13.35□□□□□ -0.27
CSMD2-202ENST00000338325 GRXCR2A6NFK2 248 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms