RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SH3RF1Q7Z6J0 888 aa16.52■□□□□ 0.24
CBX3-201ENST00000337620 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
CBX3-201ENST00000337620 SMARCE1Q969G3 411 aa16.52■□□□□ 0.24
CBX3-201ENST00000337620 MAF1Q9H063 256 aa16.52■□□□□ 0.24
CBX3-201ENST00000337620 SLC45A1Q9Y2W3 748 aa16.52■□□□□ 0.24
CBX3-201ENST00000337620 PFASO15067 1338 aa16.52■□□□□ 0.23
CBX3-201ENST00000337620 PASKQ96RG2 1323 aa16.52■□□□□ 0.23
CBX3-201ENST00000337620 NR3C2P08235 984 aa16.52■□□□□ 0.23
CBX3-201ENST00000337620 GRB10Q13322 594 aa16.52■□□□□ 0.23
CBX3-201ENST00000337620 LRCH2Q5VUJ6 765 aa16.52■□□□□ 0.23
CBX3-201ENST00000337620 FAM43AQ8N2R8 423 aa16.52■□□□□ 0.23
CBX3-201ENST00000337620 R3HDMLQ9H3Y0 253 aa16.52■□□□□ 0.23
CBX3-201ENST00000337620 UBIAD1Q9Y5Z9 338 aa16.52■□□□□ 0.23
CBX3-201ENST00000337620 KIF3CO14782 793 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 CCND2P30279 289 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 CCT6AP40227 531 aaKnown RBP16.51■□□□□ 0.23
CBX3-201ENST00000337620 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 ERVK-24P63145 666 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 SPIRE1Q08AE8 756 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 WDR78Q5VTH9 848 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 RASAL3Q86YV0 1011 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 LRRC15Q8TF66 581 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 GTF3C2Q8WUA4 911 aaPredicted RBP16.51■□□□□ 0.23
CBX3-201ENST00000337620 SLC5A5Q92911 643 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 PNMA5Q96PV4 448 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 PTPN18Q99952 460 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 BLZF1Q9H2G9 400 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 JADE2Q9NQC1 790 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 KCNH7Q9NS40 1196 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 PKD2L1Q9P0L9 805 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 TESPA1A2RU30 521 aaPredicted RBP16.51■□□□□ 0.23
CBX3-201ENST00000337620 IPO5O00410 1097 aaKnown RBP16.51■□□□□ 0.23
CBX3-201ENST00000337620 GAS7O60861 476 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 SMC2O95347 1197 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 NLRP12P59046 1061 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 MTMR1Q13613 665 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 RGMBQ6NW40 437 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 NIPA1Q7RTP0 329 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 VSIG10LQ86VR7 867 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 MTRQ99707 1265 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 VAV3Q9UKW4 847 aa16.51■□□□□ 0.23
CBX3-201ENST00000337620 POTEB2H3BUK9 544 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 PSMD10O75832 226 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 BCRP11274 1271 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 COPB2P35606 906 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 ECM1Q16610 540 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 XRRA1Q6P2D8 792 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 C11orf57Q6ZUT1 292 aaPredicted RBP16.5■□□□□ 0.23
CBX3-201ENST00000337620 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 ANKRD13CQ8N6S4 541 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 SMC1BQ8NDV3 1235 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 ERMNQ8TAM6 284 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 FAM200AQ8TCP9 573 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 CUEDC2Q9H467 287 aa16.5■□□□□ 0.23
CBX3-201ENST00000337620 CHMP2AO43633 222 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 ZNF165P49910 485 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 DPYDQ12882 1025 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 CUL4BQ13620 913 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 DHX8Q14562 1220 aaKnown RBP16.49■□□□□ 0.23
CBX3-201ENST00000337620 DPCR1Q3MIW9 517 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 GPRC5AQ8NFJ5 357 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 KDM3AQ9Y4C1 1321 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 GTPBP6O43824 516 aaPredicted RBP16.49■□□□□ 0.23
CBX3-201ENST00000337620 SARSP49591 514 aaKnown RBP16.49■□□□□ 0.23
CBX3-201ENST00000337620 NT5DC1Q5TFE4 455 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 HAUS3Q68CZ6 603 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 DNERQ8NFT8 737 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 TEKT3Q9BXF9 490 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 MROH8Q9H579 483 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 CBX8Q9HC52 389 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 MAN1B1Q9UKM7 699 aa16.49■□□□□ 0.23
CBX3-201ENST00000337620 DDX39AO00148 427 aaKnown RBP16.48■□□□□ 0.23
CBX3-201ENST00000337620 EML1O00423 815 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 MED24O75448 989 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 CAVIN2O95810 425 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 KCTD2Q14681 263 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 SPATA20Q8TB22 786 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 PARK7Q99497 189 aaKnown RBP16.48■□□□□ 0.23
CBX3-201ENST00000337620 NT5C3AQ9H0P0 336 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 MAGEF1Q9HAY2 307 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 AGO4Q9HCK5 861 aaKnown RBP16.48■□□□□ 0.23
CBX3-201ENST00000337620 STK17AQ9UEE5 414 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 ABT1Q9ULW3 272 aaKnown RBP16.48■□□□□ 0.23
CBX3-201ENST00000337620 KIAA1024Q9UPX6 916 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 POTEB3A0JP26 581 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
CBX3-201ENST00000337620 CCNA1P78396 465 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 PPP2R5CQ13362 524 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 TMEM119Q4V9L6 283 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 POTEBQ6S5H4 581 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 SV2BQ7L1I2 683 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 NLRX1Q86UT6 975 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 LUZP1Q86V48 1076 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 IWS1Q96ST2 819 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 MMP19Q99542 508 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 RIT2Q99578 217 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 NAT10Q9H0A0 1025 aaKnown RBP16.48■□□□□ 0.23
CBX3-201ENST00000337620 PORCNQ9H237 461 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms